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BaseInfo

ncRNA ID novel_gma_miR7459
Species Glycine max
Class miRNA
Genome position Chr1:44630253-44630355 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 24
Mature sequence(if miRNA) 1 - UUUCCAUGGAUUCUUUCUGACGAA - 24
Stem-loop(if miRNA) -C   G           U               GCAAA     A  A    
  UGU AGAAAGAAUCC UGGGAAAUUUCUGAC     AUAUU GU UGGAA
  ||| ||||||||||| |||||||||||||||     ||||| || ||||U
  GCA UCUUUCUUAGG ACCUUUUAAAGAUUG     UAUAG CA GCUUU
AA   G           U               ACUGG     G  -    
Stem-loop sequence CUGUGAGAAAGAAUCCUUGGGAAAUUUCUGACGCAAAAUAUUAGUAUGGAAUUUUCGACGGAUAUGGUCAGUUAGAAAUUUUCCAUGGAUUCUUUCUGACGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576907.2
ncRNA:24   AAGCAGUCUUUCUUAGGUACCUUU   1
  |||**=|||||||||*||||||||
targets:1887   UUCUAUAGAAAGAAUGCAUGGAAA   1910

2.5 PREDICTED: Glycine max uncharacterized LOC100791254 (LOC100791254), mRNA uncharacterized LOC100791254(LOC100791254) coding protein psRNATarget
XM_014766844.1
ncRNA:24   AAGCAGUCUUUCUUAGG-UACCUUU   1
  ****|||||||||||||-|||||||
targets:545   AAAAUCAGAAAGAAUCCUAUGGAAA   569

3.0 PREDICTED: Glycine max serine carboxypeptidase-like (LOC100794659), mRNA serine carboxypeptidase-like(LOC100794659) coding protein psRNATarget