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BaseInfo

ncRNA ID novel_gma_miR7457
Species Glycine max
Class miRNA
Genome position Chr11:23620475-23620548 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 20
Mature sequence(if miRNA) 1 - UGAAGAACAAUUAGUCAGAU - 20
Stem-loop(if miRNA) --UG               GAUAAUUGA    UU      A
    AAGAACAAUUAGUCA         UUAA  UUGUUC A
    |||||||||||||||         ||||  |||||| C
    UUCUUGUUAGUCGGU         GAUU  AACAAG A
UAAA               ---------    UU      U
Stem-loop sequence UGAAGAACAAUUAGUCAGAUAAUUGAUUAAUUUUGUUCAACAUGAACAAUUUUAGUGGCUGAUUGUUCUUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550185.3
ncRNA:20   UAGACUGAUUAACAAGAAGU   1
  *||||=||||*|||||||||
targets:1232   CUCUGGCUAAGUGUUCUUCA   1251

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 59 (LOC547661), mRNA probable protein phosphatase 2C 59(LOC547661) coding protein psRNATarget