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BaseInfo

ncRNA ID novel_gma_miR7456
Species Glycine max
Class miRNA
Genome position Chr3:34111161-34111210 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 21
Mature sequence(if miRNA) 1 - CCUUAUUAUAAGCAACAAGUU - 21
Stem-loop(if miRNA) --          A         UAC
  CCUUAUUAUA GCAACAAGU   A
  |||||||||| |||||||||
  GGAAUAAUAU CGUUGUUCA   C
CA          C         CAU
Stem-loop sequence CCUUAUUAUAAGCAACAAGUUACACUACACUUGUUGCCUAUAAUAAGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003528082.3
ncRNA:21   UUGAACAACGAAUAUUAUUCC   1
  ||=|||||*||||||||||||
targets:1865   AAUUUGUUUCUUAUAAUAAGG   1885

2.5 PREDICTED: Glycine max uncharacterized LOC100814200 (LOC100814200), mRNA uncharacterized LOC100814200(LOC100814200) coding protein psRNATarget
AK286366.1
ncRNA:21   UUGAACAACGAAUAUUAUUCC   1
  *|*|||||*||||||||||||
targets:1110   UAGUUGUUUCUUAUAAUAAGG   1130

2.5 Glycine max cDNA, clone: GMFL01-26-M07 NA coding protein psRNATarget
XM_003542937.3
ncRNA:21   UUGAACAACGAAUAUUAUUCC   1
  *|*|||||*||||||||||||
targets:1194   UAGUUGUUUCUUAUAAUAAGG   1214

2.5 PREDICTED: Glycine max pyridoxal 5'-phosphate synthase subunit PDX1 (LOC100816306), mRNA pyridoxal 5'-phosphate synthase subunit PDX1(LOC100816306) coding protein psRNATarget