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BaseInfo

ncRNA ID novel_gma_miR7450
Species Glycine max
Class miRNA
Genome position Chr1:10757849-10757894 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610;SRR1451611;SRR1451612
Length 21
Mature sequence(if miRNA) 26 - UUUUAUUUUGCAAGGACAAUU - 46
Stem-loop(if miRNA) --UU              C  UU
    UUAUUUUGCAAGGA AA  A
    |||||||||||||| ||
    GGUAAGACGUUUCU UU  A
UUGC              A  UU
Stem-loop sequence UUUUAUUUUGCAAGGACAAUUAAUUUUAUCUUUGCAGAAUGGCGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584656.2
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  |||||||*|||||||||||*|
targets:375   AAUUGUCAUUGCAAAAUAACA   395

2.5 PREDICTED: Glycine max uncharacterized LOC100811734 (LOC100811734), transcript variant X2, mRNA uncharacterized LOC100811734(LOC100811734) coding protein psRNATarget
XM_014775826.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  |||||||*|||||||||||*|
targets:322   AAUUGUCAUUGCAAAAUAACA   342

2.5 PREDICTED: Glycine max uncharacterized LOC100778683 (LOC100778683), transcript variant X2, mRNA uncharacterized LOC100778683(LOC100778683) coding protein psRNATarget
BT094585.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  =*|||||=||||||||*||||
targets:1090   GUUUGUCUUUGCAAAAAAAAA   1110

2.5 Soybean clone JCVI-FLGm-18J8 unknown mRNA NA coding protein psRNATarget
XM_014764456.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1578   CAUUUUCCUUGCAAAAAAAAA   1598

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X6, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
XM_014764454.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1704   CAUUUUCCUUGCAAAAAAAAA   1724

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X2, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
XM_003540733.3
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1827   CAUUUUCCUUGCAAAAAAAAA   1847

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X4, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
XM_014764453.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1836   CAUUUUCCUUGCAAAAAAAAA   1856

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X1, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
XM_003540734.3
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1877   CAUUUUCCUUGCAAAAAAAAA   1897

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X5, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
XM_014764455.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  *|||*|||||||||||*||||
targets:1886   CAUUUUCCUUGCAAAAAAAAA   1906

2.5 PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X3, mRNA uncharacterized LOC100807371(LOC100807371) coding protein psRNATarget
AK287201.1
ncRNA:21   UUAACAGGAACGUUUUAUUUU   1
  ==|||*||||||||||*||||
targets:3276   GGUUGGCCUUGCAAAAAAAAA   3296

2.5 Glycine max cDNA, clone: GMFL01-46-G17 NA coding protein psRNATarget