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BaseInfo

ncRNA ID novel_gma_miR7437
Species Glycine max
Class miRNA
Genome position Chr10:4990535-4990603 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 46 - AUGAAGUUCAUCCGUAUGAUUGAU - 69
Stem-loop(if miRNA) --       U        U    G         A
  AUGAAGU CAUCCGUA GAUU AUACGAAUG A
  ||||||| |||||||| |||| ||||||||| C
  UACUUCA GUAGGCAU CUGA UAUGCUUAC U
CC       U        U    G         U
Stem-loop sequence AUGAAGUUCAUCCGUAUGAUUGAUACGAAUGAACUUCAUUCGUAUGAGUCUUACGGAUGUACUUCAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573065.2
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  |*||*|||||||||||||*|||||
targets:3860   AACAUUCAUACGGAUGAAGUUCAU   3883

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_006573065.2
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  ||*|*|||||||||||||*|||||
targets:3922   AUGACUCAUACGGAUGAAGUUCAU   3945

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773439.1
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  |*||*|||||||||||||*|||||
targets:3860   AACAUUCAUACGGAUGAAGUUCAU   3883

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773439.1
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  ||*|*|||||||||||||*|||||
targets:3922   AUGACUCAUACGGAUGAAGUUCAU   3945

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773434.1
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  |*||*|||||||||||||*|||||
targets:3860   AACAUUCAUACGGAUGAAGUUCAU   3883

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773434.1
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  ||*|*|||||||||||||*|||||
targets:3922   AUGACUCAUACGGAUGAAGUUCAU   3945

1.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_003520377.2
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  |*|=*|||||||||||||*|||||
targets:1903   AACGUUCAUACGGAUGAAGUUCAU   1926

1.5 PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) coding protein psRNATarget
XM_006583693.2
ncRNA:24   UAGUUAGUAUGCCUACUUGAAGUA   1
  |*|=*|||||||||||||*|||||
targets:448   AACGUUCAUACGGAUGAAGUUCAU   471

1.5 PREDICTED: Glycine max uncharacterized LOC102663037 (LOC102663037), mRNA uncharacterized LOC102663037(LOC102663037) coding protein psRNATarget