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BaseInfo

ncRNA ID novel_gma_miR7435
Species Glycine max
Class miRNA
Genome position Chr18:3286923-3286996 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 1 - AAGAGAAUUUUGCAUGUAGGAACU - 24
Stem-loop(if miRNA) -U   A      -         AAA   G AU   AG
  UUC UAUAUG AGAAUUCUU   AUU A  UAU  U
  ||| |||||| |||||||||   ||| |  |||
  AAG AUGUAC UUUUAAGAG   UAA U  GUG  A
UC   G      G         AAA   G GU   GA
Stem-loop sequence UUUCAUAUAUGAGAAUUCUUAAAAUUGAAUUAUAGUAAGGUGUGUGAAUAAAGAGAAUUUUGCAUGUAGGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544029.2
ncRNA:24   UCAAGGAUGUACGUUUUAAGAGAA   1
  =||--||=||||||||||*|||||
targets:559   GGU--CUGCAUGCAAAAUCCUCUU   580

2.5 PREDICTED: Glycine max proline-rich receptor-like protein kinase PERK1 (LOC100788862), mRNA proline-rich receptor-like protein kinase PERK1(LOC100788862) coding protein psRNATarget