ncRNA ID | novel_gma_miR7431 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:35275367-35275483 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGAACCGUCUUAGAAUGUAAGC - 24 |
Stem-loop(if miRNA) |
--AGAUU               C       CU      A       -GU     AAAAA        UUUUAAGAUGGUUCU UGGAAAA  GUCUUA AAUUCUU   UUUUU     A        ||||||||||||||| |||||||  |||||| |||||||   |||||        AAGAUUCUGCCAAGA ACUUUUU  UAGAAU UUAAGAG   AAAAA     A CGAAUGU               A       UG      C       AUU     CCUAA |
Stem-loop sequence | AGAUUUUUUAAGAUGGUUCUCUGGAAAACUGUCUUAAAAUUCUUGUUUUUUAAAAAAAAAUCCAAAAAUUAGAGAAUUCUAAGAUGUUUUUUCAAAGAACCGUCUUAGAAUGUAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
0.0 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_014771087.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_014773514.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget |