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BaseInfo

ncRNA ID novel_gma_miR7431
Species Glycine max
Class miRNA
Genome position Chr1:35275367-35275483 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 1 - AAAGAACCGUCUUAGAAUGUAAGC - 24
Stem-loop(if miRNA) --AGAUU               C       CU      A       -GU     AAAAA
       UUUUAAGAUGGUUCU UGGAAAA  GUCUUA AAUUCUU   UUUUU     A
       ||||||||||||||| |||||||  |||||| |||||||   |||||
       AAGAUUCUGCCAAGA ACUUUUU  UAGAAU UUAAGAG   AAAAA     A
CGAAUGU               A       UG      C       AUU     CCUAA
Stem-loop sequence AGAUUUUUUAAGAUGGUUCUCUGGAAAACUGUCUUAAAAUUCUUGUUUUUUAAAAAAAAAUCCAAAAAUUAGAGAAUUCUAAGAUGUUUUUUCAAAGAACCGUCUUAGAAUGUAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CGAAUGUAAGAUUCUGCCAAGAAA   1
  ****||||||||||||||||||||
targets:2509   AAACACAUUCUAAGACGGUUCUUU   2532

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   CGAAUGUAAGAUUCUGCCAAGAAA   1
  ***|||||||||||||||||||*|
targets:2605   AAAUACAUUCUAAGACGGUUCUCU   2628

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014773514.1
ncRNA:24   CGAAUGUAAGAUUCUGCCAAGAAA   1
  *|**||||||||||||||||*|||
targets:264   ACACACAUUCUAAGACGGUUAUUU   287

1.5 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget