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BaseInfo

ncRNA ID novel_gma_miR7430
Species Glycine max
Class miRNA
Genome position Chr17:6713083-6713298 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 193 - AGAGAAAACCAUUUUGGUGACAUG - 216
Stem-loop(if miRNA) --    A    -                   AA                       A         -        AGUAGAA             A       GU   CAAA
  AGAG AAAC CAUUUUGGUGACAUGUUUG  UACCCUCAAAAGUAUGUUUGCAC UGAAAAUUU ACCUGGAA       ACUUAGUUUUGUA AAGUAAG  UUG    A
  |||| |||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||       ||||||||||||| |||||||  |||    G
  UCUC UUUG GUAAAACCACUGUACAAAC  AUGGGAGUUUUCAUACAAACGUG ACUUUUAAA UGGACCUU       UGAAUCAAAACAU UUCAUUC  AAC    U
CC    A    A                   CA                       C         A        -------             C       UG   CCAA
Stem-loop sequence AGAGAAAACCAUUUUGGUGACAUGUUUGAAUACCCUCAAAAGUAUGUUUGCACAUGAAAAUUUACCUGGAAAGUAGAAACUUAGUUUUGUAAAAGUAAGGUUUGCAAAAGUAACCCAAGUCUUACUUCUACAAAACUAAGUUUCCAGGUAAAAUUUUCACGUGCAAACAUACUUUUGAGGGUAACCAAACAUGUCACCAAAAUGAGUUUACUCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531026.3
ncRNA:24   GUACAGUGGUUUUACCAAAAGAGA   1
  *=|*|=*||||||||||||||||*
targets:343   GGUUUUUCCAAAAUGGUUUUCUCG   366

3.0 PREDICTED: Glycine max fatty acid 2-hydroxylase 2-like (LOC100801061), mRNA fatty acid 2-hydroxylase 2-like(LOC100801061) coding protein psRNATarget