ncRNA ID | novel_gma_miR7430 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:6713083-6713298 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610 |
Length | 24 |
Mature sequence(if miRNA) | 193 - AGAGAAAACCAUUUUGGUGACAUG - 216 |
Stem-loop(if miRNA) |
--    A    -                   AA                       A         -        AGUAGAA             A       GU   CAAA   AGAG AAAC CAUUUUGGUGACAUGUUUG  UACCCUCAAAAGUAUGUUUGCAC UGAAAAUUU ACCUGGAA       ACUUAGUUUUGUA AAGUAAG  UUG    A   |||| |||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||       ||||||||||||| |||||||  |||    G   UCUC UUUG GUAAAACCACUGUACAAAC  AUGGGAGUUUUCAUACAAACGUG ACUUUUAAA UGGACCUU       UGAAUCAAAACAU UUCAUUC  AAC    U CC    A    A                   CA                       C         A        -------             C       UG   CCAA |
Stem-loop sequence | AGAGAAAACCAUUUUGGUGACAUGUUUGAAUACCCUCAAAAGUAUGUUUGCACAUGAAAAUUUACCUGGAAAGUAGAAACUUAGUUUUGUAAAAGUAAGGUUUGCAAAAGUAACCCAAGUCUUACUUCUACAAAACUAAGUUUCCAGGUAAAAUUUUCACGUGCAAACAUACUUUUGAGGGUAACCAAACAUGUCACCAAAAUGAGUUUACUCUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531026.3 |
|
3.0 | PREDICTED: Glycine max fatty acid 2-hydroxylase 2-like (LOC100801061), mRNA | fatty acid 2-hydroxylase 2-like(LOC100801061) | coding protein | psRNATarget |