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BaseInfo

ncRNA ID novel_gma_miR7424
Species Glycine max
Class miRNA
Genome position Chr10:17411085-17411168 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 21
Mature sequence(if miRNA) 1 - UUUAGAACCGAUGUAGAAUAU - 21
Stem-loop(if miRNA) --                           UG        UGU
  AUUUUACAUCGGUUCUGAAGGUACAAA  AUGUAGAA   C
  |||||||||||||||||||||||||||  ||||||||
  UAAGAUGUAGCCAAGAUUUCUAUGUUU  UACAUCUU   A
UA                           GU        UCA
Stem-loop sequence AUUUUACAUCGGUUCUGAAGGUACAAAUGAUGUAGAAUGUCAACUUUCUACAUUGUUUGUAUCUUUAGAACCGAUGUAGAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539359.3
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  ***|||||||||||||||||*
targets:2687   UCCUUCUACAUCGGUUCUAAU   2707

2.0 PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA MLO-like protein 6(LOC100776714) coding protein psRNATarget
XM_006588741.2
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  *||||||||||||*||||||*
targets:2875   CUAUUCUACAUCGAUUCUAAC   2895

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  *||||||||||||*||||||*
targets:2971   CUAUUCUACAUCGAUUCUAAC   2991

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget
XM_014766969.1
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  =*|||||=||||*||||||||
targets:923   GAAUUCUGCAUCAGUUCUAAA   943

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X3, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget
XM_014766968.1
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  =*|||||=||||*||||||||
targets:1006   GAAUUCUGCAUCAGUUCUAAA   1026

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X2, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget
AK244137.1
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  =*|||||=||||*||||||||
targets:1024   GAAUUCUGCAUCAGUUCUAAA   1044

2.5 Glycine max cDNA, clone: GMFL01-02-D03 NA coding protein psRNATarget
XM_003544367.3
ncRNA:21   UAUAAGAUGUAGCCAAGAUUU   1
  =*|||||=||||*||||||||
targets:1082   GAAUUCUGCAUCAGUUCUAAA   1102

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X1, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget