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BaseInfo

ncRNA ID novel_gma_miR7416
Species Glycine max
Class miRNA
Genome position Chr15:8497803-8497922 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 22
Mature sequence(if miRNA) 1 - CUUUUAUUGGACGUUGACCACC - 22
Stem-loop(if miRNA) --          A        A      C UG GA      G   GGUUGA        AG U
  CUUUUAUUGG CGUUGACC CCACGU U  U  UUUUAU GGA      CGUUAAUU  G G
  |||||||||| |||||||| |||||| |  |  |||||| |||      ||||||||  |
  GAAAAUAACC GCAACUGG GGUGUA A  G  AAAAUA CCU      GCAAUUAA  C C
GC          C        C      C GU UG      A   ------        AA A
Stem-loop sequence CUUUUAUUGGACGUUGACCACCACGUCUUGUGAUUUUAUGGGAGGUUGACGUUAAUUAGGUGCACAAAAUUAACGUCCAAUAAAAGUGUGACAUGUGGCGGUCAACGCCCAAUAAAAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003545763.3
ncRNA:22   CCACCAGUUGCAGGUUAUUUUC   1
  ||*||||||||||||||||||*
targets:340   GGCGGUCAACGUCCAAUAAAAC   361

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) coding protein psRNATarget
XM_006598012.2
ncRNA:22   CCACCAGUUGCAGGUUAUUUUC   1
  ||*||||||||||||||||||*
targets:269   GGCGGUCAACGUCCAAUAAAAC   290

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) coding protein psRNATarget