ncRNA ID | novel_gma_miR7412 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:45125886-45125977 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGAGAAUCGUUAAGGUGUUGGACC - 24 |
Stem-loop(if miRNA) |
--      -         U   G  -CC       -A      G  UU   CGAGAA UCGUUAAGG GUU GA   UUUAACG  UCUCUU UU  U   |||||| ||||||||| ||| ||   |||||||  |||||| ||   GUUCUU AGCAAUUUC CAG UU   GAGUUGC  AGAGAG AA  U UU      U         -   G  ACA       AA      G  UU |
Stem-loop sequence | CGAGAAUCGUUAAGGUGUUGGACCUUUAACGAUCUCUUGUUUUUUUUAAGGAGAGAAACGUUGAGACAUUGGACCUUUAACGAUUUCUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK245850.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-43-E18 | NA | coding protein | psRNATarget | |||||||||
XM_003534936.3 |
|
2.5 | PREDICTED: Glycine max farnesyl pyrophosphate synthase 1 (LOC100802347), mRNA | farnesyl pyrophosphate synthase 1(LOC100802347) | coding protein | psRNATarget |