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BaseInfo

ncRNA ID novel_gma_miR7412
Species Glycine max
Class miRNA
Genome position Chr15:45125886-45125977 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 1 - CGAGAAUCGUUAAGGUGUUGGACC - 24
Stem-loop(if miRNA) --      -         U   G  -CC       -A      G  UU
  CGAGAA UCGUUAAGG GUU GA   UUUAACG  UCUCUU UU  U
  |||||| ||||||||| ||| ||   |||||||  |||||| ||
  GUUCUU AGCAAUUUC CAG UU   GAGUUGC  AGAGAG AA  U
UU      U         -   G  ACA       AA      G  UU
Stem-loop sequence CGAGAAUCGUUAAGGUGUUGGACCUUUAACGAUCUCUUGUUUUUUUUAAGGAGAGAAACGUUGAGACAUUGGACCUUUAACGAUUUCUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245850.1
ncRNA:24   CCAGGUUGUGGAAUUGCUAAGAGC   1
  ||*|*||||*|||||||*||||||
targets:16   GGGCAAACAGCUUAACGCUUCUCG   39

2.5 Glycine max cDNA, clone: GMFL01-43-E18 NA coding protein psRNATarget
XM_003534936.3
ncRNA:24   CCAGGUUGUGGAAUUGCUAAGAGC   1
  ||*|*||||*|||||||*||||||
targets:19   GGGCAAACAGCUUAACGCUUCUCG   42

2.5 PREDICTED: Glycine max farnesyl pyrophosphate synthase 1 (LOC100802347), mRNA farnesyl pyrophosphate synthase 1(LOC100802347) coding protein psRNATarget