ncRNA ID | novel_gma_miR7398 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:36166559-36166667 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610;SRR1451626 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAGGAACGGUAGAAACAAGCUU - 22 |
Stem-loop(if miRNA) |
--         U   AA    CUU  AACAAG     G  UAU    A     ACCC   UAGGAACGG AGA  CAAG   AG      GUCCA UC   UUCA UUGUU    A   ||||||||| |||  ||||   ||      ||||| ||   |||| |||||   AUCCUUGUC UCU  GUUC   UC      UAGGU AG   GAGU AACAA    A AA         -   CA    --U  CAAAGA     -  UCU    -     AACA |
Stem-loop sequence | UAGGAACGGUAGAAACAAGCUUAGAACAAGGUCCAGUCUAUUUCAAUUGUUACCCAAACAAAACAAUGAGUCUGAUGGAUAGAAACCUUCUUGACUCUCUGUUCCUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003517541.3 |
|
2.5 | PREDICTED: Glycine max homeobox-leucine zipper protein MERISTEM L1-like (LOC100815499), transcript variant X1, mRNA | homeobox-leucine zipper protein MERISTEM L1-like(LOC100815499) | coding protein | psRNATarget |