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BaseInfo

ncRNA ID novel_gma_miR7398
Species Glycine max
Class miRNA
Genome position Chr1:36166559-36166667 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610;SRR1451626
Length 22
Mature sequence(if miRNA) 1 - UAGGAACGGUAGAAACAAGCUU - 22
Stem-loop(if miRNA) --         U   AA    CUU  AACAAG     G  UAU    A     ACCC
  UAGGAACGG AGA  CAAG   AG      GUCCA UC   UUCA UUGUU    A
  ||||||||| |||  ||||   ||      ||||| ||   |||| |||||
  AUCCUUGUC UCU  GUUC   UC      UAGGU AG   GAGU AACAA    A
AA         -   CA    --U  CAAAGA     -  UCU    -     AACA
Stem-loop sequence UAGGAACGGUAGAAACAAGCUUAGAACAAGGUCCAGUCUAUUUCAAUUGUUACCCAAACAAAACAAUGAGUCUGAUGGAUAGAAACCUUCUUGACUCUCUGUUCCUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003517541.3
ncRNA:22   UUCGAACAAAGAUGGCAAGGAU   1
  |**|||||||||||||||||*=
targets:132   AUUCUUGUUUCUACCGUUCCAG   153

2.5 PREDICTED: Glycine max homeobox-leucine zipper protein MERISTEM L1-like (LOC100815499), transcript variant X1, mRNA homeobox-leucine zipper protein MERISTEM L1-like(LOC100815499) coding protein psRNATarget