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BaseInfo

ncRNA ID novel_gma_miR7393
Species Glycine max
Class miRNA
Genome position Chr9:30026694-30026824 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610;SRR1451612;SRR1451618
Length 21
Mature sequence(if miRNA) 1 - UUUUCUAAUUUAUUAGGGACU - 21
Stem-loop(if miRNA) --C      C       C              C   A        AUUUCCCC      A   AUA
   CCCUAA AAAUUAG AAAUUUUGUGUUUG UUC UGAUAAAU        UUUGUU UUA   U
   |||||| ||||||| |||||||||||||| ||| ||||||||        |||||| |||
   GGGAUU UUUAAUC UUUAAAACACAAAC AAG AUUAUUUA        AAAUAA AAU   A
UCA      A       U              A   G        AUUAUUUA      -   CAG
Stem-loop sequence CCCCUAACAAAUUAGCAAAUUUUGUGUUUGCUUCAUGAUAAAUAUUUCCCCUUUGUUAUUAAUAUAGACUAAAAUAAAAUUUAUUAAUUUAUUAGGAAACAAACACAAAAUUUUCUAAUUUAUUAGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587189.2
ncRNA:21   UCAGGGAUUAUUUAAUCUUUU   1
  |||=*|||||||||||||||=
targets:879   AGUUACUAAUAAAUUAGAAAG   899

3.0 PREDICTED: Glycine max gamma-tubulin complex component 4 homolog (LOC102666534), mRNA gamma-tubulin complex component 4 homolog(LOC102666534) coding protein psRNATarget