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BaseInfo

ncRNA ID novel_gma_miR7389
Species Glycine max
Class miRNA
Genome position Chr9:28242783-28242859 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 54 - AGAGAGACAAAUAGAAUUAGAAUA - 77
Stem-loop(if miRNA) --    -CC     A     -     UCUUAAAUUC   G
  UUCU   UCUAU UUGUC CUUUU          AAC U
  ||||   ||||| ||||| |||||          |||
  AAGA   AGAUA AACAG GAGAA          UUG U
AU    UUA     -     A     UAAAAACUUA   A
Stem-loop sequence UUCUCCUCUAUAUUGUCCUUUUUCUUAAAUUCAACGUUAGUUAUUCAAAAAUAAGAGAGACAAAUAGAAUUAGAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585981.2
ncRNA:24   AUAAGAUUAAGAUAAACAGAGAGA   1
  *||*=||=||||||||*|||||||
targets:244   CAUAUUAGUUCUAUUUCUCUCUCU   267

2.5 PREDICTED: Glycine max reticulon-like protein B8 (LOC100801782), transcript variant X1, mRNA reticulon-like protein B8(LOC100801782) coding protein psRNATarget
XM_003532025.3
ncRNA:24   AUAAGAUUAAGAUAAACAGAGAGA   1
  *||*=||=||||||||*|||||||
targets:244   CAUAUUAGUUCUAUUUCUCUCUCU   267

2.5 PREDICTED: Glycine max reticulon-like protein B8 (LOC100801782), transcript variant X2, mRNA reticulon-like protein B8(LOC100801782) coding protein psRNATarget
BT095814.1
ncRNA:24   AUAAGAUUAAGAUAAACAGAGAGA   1
  *||*=||=||||||||*|||||||
targets:93   CAUAUUAGUUCUAUUUCUCUCUCU   116

2.5 Soybean clone JCVI-FLGm-19N8 unknown mRNA NA coding protein psRNATarget
BT093106.1
ncRNA:24   AUAAGAUUAAGAUAAACAGAGAGA   1
  *||*=||=||||||||*|||||||
targets:93   CAUAUUAGUUCUAUUUCUCUCUCU   116

2.5 Soybean clone JCVI-FLGm-19N24 unknown mRNA NA coding protein psRNATarget