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BaseInfo

ncRNA ID novel_gma_miR7385
Species Glycine max
Class miRNA
Genome position Chr8:8896455-8896532 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 21
Mature sequence(if miRNA) 58 - CCAUUAGCUAAUUCGUAGAAG - 78
Stem-loop(if miRNA) --             C     A CU    C  ---A   U
  CCAUUAGCUAAUU GUAGA G  CUCU AU    UAG U
  ||||||||||||| ||||| |  |||| ||    ||| U
  GGUAAUCGAUUAA CAUCU C  GAGA UA    AUC C
GA             A     A AG    U  GAAA   U
Stem-loop sequence CCAUUAGCUAAUUCGUAGAAGCUCUCUCAUAUAGUUUCUCUAAAAGAUUAGAGGACAUCUACAAAUUAGCUAAUGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763080.1
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |||||||*|||||||||||||
targets:3634   CUUCUACAAAUUAGCUAAUGG   3654

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021) coding protein psRNATarget
XM_014763076.1
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |||||||*|||||||||||||
targets:3739   CUUCUACAAAUUAGCUAAUGG   3759

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021) coding protein psRNATarget
XM_014763077.1
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |||||||*|||||||||||||
targets:3870   CUUCUACAAAUUAGCUAAUGG   3890

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021) coding protein psRNATarget
XM_014763079.1
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |||||||*|||||||||||||
targets:3882   CUUCUACAAAUUAGCUAAUGG   3902

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021) coding protein psRNATarget
XM_014763075.1
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |||||||*|||||||||||||
targets:3971   CUUCUACAAAUUAGCUAAUGG   3991

1.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021) coding protein psRNATarget
XM_006603606.2
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  =||||||*|||||||||||||
targets:1531   UUUCUACAAAUUAGCUAAUGG   1551

1.0 PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA uncharacterized LOC100500460(LOC100500460) coding protein psRNATarget
XM_006603608.2
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  =||||||*|||||||||||||
targets:1541   UUUCUACAAAUUAGCUAAUGG   1561

1.0 PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA uncharacterized LOC100500460(LOC100500460) coding protein psRNATarget
XM_003525187.3
ncRNA:21   GAAGAUGCUUAAUCGAUUACC   1
  |*|||||*||||||||||||*
targets:1910   CAUCUACAAAUUAGCUAAUGA   1930

2.0 PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA uncharacterized LOC100801179(LOC100801179) coding protein psRNATarget