ncRNA ID | novel_gma_miR7380 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:4939928-4940062 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AAGUUGAUCCGUAAGCCUUUUAUG - 135 |
Stem-loop(if miRNA) |
--     UU      A     G   AUC     AA  C           G                U   UAAAA  CUUACG AUCAA UUG   CGUAA  UU UUACGGAUCAA UUGAUCCGUAUGUUGA A   |||||  |||||| ||||| |||   |||||  || ||||||||||| |||||||||||||||| U   AUUUU  GAAUGC UAGUU AAC   GUAUU  AA AAUGUUUAGUU AACUAGGCAUACGAUU U GU     CC      C     G   CAA     AG  A           G                U |
Stem-loop sequence | UAAAAUUCUUACGAAUCAAGUUGAUCCGUAAAAUUCUUACGGAUCAAGUUGAUCCGUAUGUUGAUAUUUUUAGCAUACGGAUCAAGUUGAUUUGUAAAAAGAUUAUGAACCAAGUUGAUCCGUAAGCCUUUUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600975.2 |
|
1.0 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |