ncRNA ID | novel_gma_miR7378 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:42635233-42635397 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451610 |
Length | 20 |
Mature sequence(if miRNA) | 146 - UUAGACUUAGAUUCUGAUUC - 165 |
Stem-loop(if miRNA) |
--       -A          -A   ---CCAAU   -    U    UUUU    A  -   AAUUCCAAA      GUGC      A        AUCAGGG  UGAGUUUGAU  ACU        GAU ACGG GAGU    CCCA CC GUU         UCAAUG    AUAUUU UUUCCA   |||||||  ||||||||||  |||        ||| |||| ||||    |||| || |||         ||||||    |||||| |||||U   UAGUCUU  AUUCAGAUUA  UGA        CUG UGCC UUUA    GGGU GG CGA         AGUUAU    UGUAAA AGAGGU CU       AG          AG   AACGAAAU   G    -    UUGU    -  A   ---------      ----      A      |
Stem-loop sequence | AUCAGGGAUGAGUUUGAUAACUCCAAUGAUACGGUGAGUUUUUCCCAACCGUUAAUUCCAAAUCAAUGGUGCAUAUUUAUUUCCAUUGGAGAAAAAUGUUAUUGAAGCAGGUGGGUGUUAUUUCCGUGGUCUAAAGCAAAGUGAAUUAGACUUAGAUUCUGAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519565.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100814102 (LOC100814102), mRNA | uncharacterized LOC100814102(LOC100814102) | coding protein | psRNATarget |