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BaseInfo

ncRNA ID novel_gma_miR7378
Species Glycine max
Class miRNA
Genome position Chr7:42635233-42635397 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 20
Mature sequence(if miRNA) 146 - UUAGACUUAGAUUCUGAUUC - 165
Stem-loop(if miRNA) --       -A          -A   ---CCAAU   -    U    UUUU    A  -   AAUUCCAAA      GUGC      A     
  AUCAGGG  UGAGUUUGAU  ACU        GAU ACGG GAGU    CCCA CC GUU         UCAAUG    AUAUUU UUUCCA
  |||||||  ||||||||||  |||        ||| |||| ||||    |||| || |||         ||||||    |||||| |||||U
  UAGUCUU  AUUCAGAUUA  UGA        CUG UGCC UUUA    GGGU GG CGA         AGUUAU    UGUAAA AGAGGU
CU       AG          AG   AACGAAAU   G    -    UUGU    -  A   ---------      ----      A     
Stem-loop sequence AUCAGGGAUGAGUUUGAUAACUCCAAUGAUACGGUGAGUUUUUCCCAACCGUUAAUUCCAAAUCAAUGGUGCAUAUUUAUUUCCAUUGGAGAAAAAUGUUAUUGAAGCAGGUGGGUGUUAUUUCCGUGGUCUAAAGCAAAGUGAAUUAGACUUAGAUUCUGAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519565.3
ncRNA:20   CUUAGUCUUAGAUUCAGAUU   1
  *|||*|||||||*|||||||
targets:787   UAAUGAGAAUCUUAGUCUAA   806

2.5 PREDICTED: Glycine max uncharacterized LOC100814102 (LOC100814102), mRNA uncharacterized LOC100814102(LOC100814102) coding protein psRNATarget