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BaseInfo

ncRNA ID novel_gma_miR7375
Species Glycine max
Class miRNA
Genome position Chr12:12092019-12092099 [+]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 58 - AUGUCAACAGCGGAAGAAAACUUC - 81
Stem-loop(if miRNA) --AGA           A          A           U
     UUUCUUCCGCU UUGACAUUAC ACUGCGGAAGA A
     ||||||||||| |||||||||| ||||||||||| G
     AAAGAAGGCGA AACUGUAAUG UGACGCCUUCU C
CUUCA           C          A           U
Stem-loop sequence AGAUUUCUUCCGCUAUUGACAUUACAACUGCGGAAGAUAGCUUCUUCCGCAGUAGUAAUGUCAACAGCGGAAGAAAACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527348.3
ncRNA:24   CUUCAAAAGAAGGCGACAACUGUA   1
  *|||||||=||||||*||||||||
targets:2320   CAAGUUUUUUUCCGCAGUUGACAU   2343

2.5 PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA uncharacterized LOC100788685(LOC100788685) coding protein psRNATarget
XM_014768519.1
ncRNA:24   CUUCAAAAGAAGGCGACAACUGUA   1
  *=|**|||||||=||||||||||*
targets:203   UGACAUUUCUUCUGCUGUUGACAA   226

2.5 PREDICTED: Glycine max sister chromatid cohesion 1 protein 2-like (LOC100775734), mRNA sister chromatid cohesion 1 protein 2-like(LOC100775734) coding protein psRNATarget