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BaseInfo

ncRNA ID novel_gma_miR7374
Species Glycine max
Class miRNA
Genome position Chr6:47727501-47727563 [-]
Reference genome Glycine_max_v2.0
Source SRR1451610
Length 24
Mature sequence(if miRNA) 1 - AGAGAAGAUAGAUAAGUUAGACUU - 24
Stem-loop(if miRNA) --A G       A       A     A    A
   U UAAUUUA CUAUUUU UCUUU CAAA G
   | ||||||| ||||||| ||||| ||||
   A AUUGAAU GAUAGAA AGAGG GUUU G
UUC G       A       G     -    A
Stem-loop sequence AUGUAAUUUAACUAUUUUAUCUUUACAAAAGGAUUUGGGAGAGAAGAUAGAUAAGUUAGACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593813.2
ncRNA:24   UUCAGAU-UGAAUAGAUAGAAGAGA   1
  *=*||||-|=|||||||||||||||
targets:47   UGAUCUACAUUUAUCUAUCUUCUCU   71

3.0 PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X1, mRNA zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) coding protein psRNATarget
XM_003542138.3
ncRNA:24   UUCAGAU-UGAAUAGAUAGAAGAGA   1
  *=*||||-|=|||||||||||||||
targets:47   UGAUCUACAUUUAUCUAUCUUCUCU   71

3.0 PREDICTED: Glycine max zinc finger protein CONSTANS-LIKE 9-like (LOC100800832), transcript variant X2, mRNA zinc finger protein CONSTANS-LIKE 9-like(LOC100800832) coding protein psRNATarget