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BaseInfo

ncRNA ID novel_gma_miR7350
Species Glycine max
Class miRNA
Genome position Chr15:14288879-14289040 [-]
Reference genome Glycine_max_v2.0
Source DRR031984
Length 24
Mature sequence(if miRNA) 1 - UAAGAACGUGACAUGUGACAGUCA - 24
Stem-loop(if miRNA) --               A        A   A           C   C           AGAU     CUUCAUG        AAU
  ACUGUCACGUGUCAC UUCUUAUU AAU AUGAUUGUCAC UGU AUGUUCUGAUU    GUCAA       GAAGAUAA   A
  ||||||||||||||| |||||||| ||| ||||||||||| ||| |||||||||||    |||||       ||||||||   C
  UGACAGUGUACAGUG AAGAAUAA UUA UAUUAACAGUG ACA UACAAGACUAA    CAGUU       CUUUUGUU   A
AC               C        C   C           C   A           ---C     ------A        GUU
Stem-loop sequence ACUGUCACGUGUCACAUUCUUAUUAAAUAAUGAUUGUCACCUGUCAUGUUCUGAUUAGAUGUCAACUUCAUGGAAGAUAAAAUACAUUGUUGUUUUCAUUGACCAAUCAGAACAUAACACGUGACAAUUAUCAUUCAAUAAGAACGUGACAUGUGACAGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:24   ACUGACAGUGUACAGUGCAAGAAU   1
  ||||||||||=|||||||||=|||
targets:532   UGACUGUCACGUGUCACGUUUUUA   555

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget
XM_003518407.3
ncRNA:24   ACUGACAGUGUACAGUGCAAGAAU   1
  ||||||||||=|||||||||||*|
targets:1633   UGACUGUCACGUGUCACGUUCUGA   1656

2.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA UPF0481 protein At3g47200-like(LOC100803577) coding protein psRNATarget
XM_003529834.3
ncRNA:24   ACUGACAGUGUACAGUGCAAGAAU   1
  ||||*|||||=|||||||||=|||
targets:2005   UGACGGUCACGUGUCACGUUUUUA   2028

2.5 PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X2, mRNA laccase-6-like(LOC100789406) coding protein psRNATarget
XM_014777738.1
ncRNA:24   ACUGACAGUGUACAGUGCAAGAAU   1
  ||||*|||||=|||||||||=|||
targets:2150   UGACGGUCACGUGUCACGUUUUUA   2173

2.5 PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X1, mRNA laccase-6-like(LOC100789406) coding protein psRNATarget