ncRNA ID | novel_gma_miR7350 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:14288879-14289040 [-] |
Reference genome | Glycine_max_v2.0 |
Source | DRR031984 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGAACGUGACAUGUGACAGUCA - 24 |
Stem-loop(if miRNA) |
--               A        A   A           C   C           AGAU     CUUCAUG        AAU   ACUGUCACGUGUCAC UUCUUAUU AAU AUGAUUGUCAC UGU AUGUUCUGAUU    GUCAA       GAAGAUAA   A   ||||||||||||||| |||||||| ||| ||||||||||| ||| |||||||||||    |||||       ||||||||   C   UGACAGUGUACAGUG AAGAAUAA UUA UAUUAACAGUG ACA UACAAGACUAA    CAGUU       CUUUUGUU   A AC               C        C   C           C   A           ---C     ------A        GUU |
Stem-loop sequence | ACUGUCACGUGUCACAUUCUUAUUAAAUAAUGAUUGUCACCUGUCAUGUUCUGAUUAGAUGUCAACUUCAUGGAAGAUAAAAUACAUUGUUGUUUUCAUUGACCAAUCAGAACAUAACACGUGACAAUUAUCAUUCAAUAAGAACGUGACAUGUGACAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget | |||||||||
XM_003518407.3 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA | UPF0481 protein At3g47200-like(LOC100803577) | coding protein | psRNATarget | |||||||||
XM_003529834.3 |
|
2.5 | PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X2, mRNA | laccase-6-like(LOC100789406) | coding protein | psRNATarget | |||||||||
XM_014777738.1 |
|
2.5 | PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X1, mRNA | laccase-6-like(LOC100789406) | coding protein | psRNATarget |