Search result

BaseInfo

ncRNA ID novel_gma_miR7331
Species Glycine max
Class miRNA
Genome position Chr19:882781-882867 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 21
Mature sequence(if miRNA) 67 - UACAAAUCUUUGAAAAUAGAA - 87
Stem-loop(if miRNA) --                     A      GA        AAA
  CUGUUUUCAAAGAUUUGUACA GAAAUG  GAAAACAA   A
  ||||||||||||||||||||| ||||||  ||||||||   A
  GAUAAAAGUUUCUAAACAUGU CUUUGU  UUUUUGUU   A
AA                     C      GC        GAA
Stem-loop sequence CUGUUUUCAAAGAUUUGUACAAGAAAUGGAGAAAACAAAAAAAAAAGUUGUUUUUCGUGUUUCCUGUACAAAUCUUUGAAAAUAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769090.1
ncRNA:21   AAG-AUAAAAGUUUCUAAACAU   1
  |||-|=||||||||||||||||
targets:6   UUCAUGUUUUCAAAGAUUUGUA   27

3.0 PREDICTED: Glycine max pectin acetylesterase 8-like (LOC100781246), transcript variant X1, mRNA pectin acetylesterase 8-like(LOC100781246) coding protein psRNATarget