ncRNA ID | novel_gma_miR7313 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:28787056-28787256 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAAUACUUAUAUGUUGUUUGUC - 22 |
Stem-loop(if miRNA) |
--      U                     U                  GUAU  UA       -  U   U            -ACU    U   -U      A   UAAUAC UAUAUGUUGUUUGUCUUUUCU AAAUUUGUUGAAAUUUUG    AC  CAUUUCA CU UGU CUCCGAGUACAU    UGAA GCG  UGCAUG A   |||||| ||||||||||||||||||||| ||||||||||||||||||    ||  ||||||| || ||| ||||||||||||    |||| |||  ||||||   AUUAUG AUAUACAAUAAACGGAAAAGA UUUAAACAACUUUAAAGC    UG  GUAAAGU GA ACA GAGGUUCAUGUG    ACUU CGC  ACGUAC U UG      C                     -                  ----  UC       C  U   -            CUCU    U   CC      A |
Stem-loop sequence | UAAUACUUAUAUGUUGUUUGUCUUUUCUUAAAUUUGUUGAAAUUUUGGUAUACUACAUUUCACUUUGUUCUCCGAGUACAUACUUGAAUGCGUUGCAUGAAUACAUGCACCCGCUUUCAUCUCGUGUACUUGGAGACAUAGCUGAAAUGCUGUCGAAAUUUCAACAAAUUUAGAAAAGGCAAAUAACAUAUACGUAUUAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773840.1 |
|
1.5 | PREDICTED: Glycine max pleiotropic drug resistance protein 1-like (LOC100791601), mRNA | pleiotropic drug resistance protein 1-like(LOC100791601) | coding protein | psRNATarget |