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BaseInfo

ncRNA ID novel_gma_miR7313
Species Glycine max
Class miRNA
Genome position Chr14:28787056-28787256 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 1 - UAAUACUUAUAUGUUGUUUGUC - 22
Stem-loop(if miRNA) --      U                     U                  GUAU  UA       -  U   U            -ACU    U   -U      A
  UAAUAC UAUAUGUUGUUUGUCUUUUCU AAAUUUGUUGAAAUUUUG    AC  CAUUUCA CU UGU CUCCGAGUACAU    UGAA GCG  UGCAUG A
  |||||| ||||||||||||||||||||| ||||||||||||||||||    ||  ||||||| || ||| ||||||||||||    |||| |||  ||||||
  AUUAUG AUAUACAAUAAACGGAAAAGA UUUAAACAACUUUAAAGC    UG  GUAAAGU GA ACA GAGGUUCAUGUG    ACUU CGC  ACGUAC U
UG      C                     -                  ----  UC       C  U   -            CUCU    U   CC      A
Stem-loop sequence UAAUACUUAUAUGUUGUUUGUCUUUUCUUAAAUUUGUUGAAAUUUUGGUAUACUACAUUUCACUUUGUUCUCCGAGUACAUACUUGAAUGCGUUGCAUGAAUACAUGCACCCGCUUUCAUCUCGUGUACUUGGAGACAUAGCUGAAAUGCUGUCGAAAUUUCAACAAAUUUAGAAAAGGCAAAUAACAUAUACGUAUUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773840.1
ncRNA:22   CUGUUUGUUGUAUAUUCAUAAU   1
  ||-|||||||||||||*|||||
targets:627   GA-AAACAACAUAUAACUAUUA   647

1.5 PREDICTED: Glycine max pleiotropic drug resistance protein 1-like (LOC100791601), mRNA pleiotropic drug resistance protein 1-like(LOC100791601) coding protein psRNATarget