ncRNA ID | novel_gma_miR7296 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:12132215-12132374 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1292929 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAACCGUCUUUGAAUGUAAACU - 24 |
Stem-loop(if miRNA) |
--ACA  U                                   -    AAA   U  CAUACCU          A     A      GC UUCAAAGACGGUUAUUUGUUAAUAACCGUCUUUGA UUGU   GUC GA       UUCAAAGACG UUAUU G      || ||||||||||||||||||||||||||||||||||| ||||   ||| ||       |||||||||| |||||      UG AAGUUUCUGCCAAUAAACGAUUAUUGGCAGAAACU GACA   CAG CU       AAGUUUCUGC AAUAA C UCAAA  U                                   U    -CA   U  UAUCCGU          C     U |
Stem-loop sequence | ACAGCUUUCAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAUUGUAAAGUCUGACAUACCUUUCAAAGACGAUUAUUAGCUAAUAACCGUCUUUGAAUGCCUAUUCUGACACACAGUUCAAAGACGGUUAUUAGCAAAUAACCGUCUUUGAAUGUAAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
0.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
0.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |