Search result

BaseInfo

ncRNA ID	novel_gma_miR7294
Species	Glycine max
Class	miRNA
Genome position	Chr13:21629148-21629315 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451609
Length	24
Mature sequence(if miRNA)	1 - UUUUAUAAGAACUAAAACAAAAAA - 24
Stem-loop(if miRNA)	--                         ----        AACUUUU      ------UA  AUACUUUAAAUAAUAUUUGUUUACUGU   UUUUGUUUUAGUUCUUGUAAAAUGU    AUUUUUUU       UAUUCU        AA                           U   |||||||||||||||||||||||||    ||||||||       ||||||        ||                           U   AAAACAAAAUCAAGAAUAUUUUACA    UAAAAAAA       AUAAGA        GA                           A AA                         CAAA        -CUAUUU      UCUAUUAC  AACUUAUCUUUUAUUUAUAUUUAUAAA
Stem-loop sequence	UUUUGUUUUAGUUCUUGUAAAAUGUAUUUUUUUAACUUUUUAUUCUUAAAAUACUUUAAAUAAUAUUUGUUUACUGUUUAAAAUAUUUAUAUUUAUUUUCUAUUCAAAGCAUUAUCUAGAAUAUUUAUCAAAAAAAUAAACACAUUUUAUAAGAACUAAAACAAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003516776.3	ncRNA:24   AAAAAACAAAAUCAAGAAUAUUUU   1   |||||*|||||||||||||||||* targets:1503   UUUUUAGUUUUAGUUCUUAUAAAC   1526 Target Full Sequence	2.0	PREDICTED: Glycine max caffeoylshikimate esterase-like (LOC100807463), transcript variant X1, mRNA	caffeoylshikimate esterase-like(LOC100807463)	coding protein	psRNATarget
XM_014774056.1	ncRNA:24   AAAAAACAAAAUCAAGAAUAUUUU   1   |||||*|||||||||||||||||* targets:1368   UUUUUAGUUUUAGUUCUUAUAAAC   1391 Target Full Sequence	2.0	PREDICTED: Glycine max caffeoylshikimate esterase-like (LOC100807463), transcript variant X2, mRNA	caffeoylshikimate esterase-like(LOC100807463)	coding protein	psRNATarget
XM_003542935.3	ncRNA:24   AAAAAACAA-AAUCAAGAAUAUUUU   1   |||*|||||-||||||||||||||* targets:1387   UUUGUUGUUAUUAGUUCUUAUAAAU   1411 Target Full Sequence	3.0	PREDICTED: Glycine max trihelix transcription factor ASIL2-like (LOC100815241), mRNA	trihelix transcription factor ASIL2-like(LOC100815241)	coding protein	psRNATarget