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BaseInfo

ncRNA ID novel_gma_miR7282
Species Glycine max
Class miRNA
Genome position Chr1:28057453-28057501 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 1 - AAUUGAUAAUCUAGGAAACCCU - 22
Stem-loop(if miRNA) --      -A    UC   UG   UG
  GGUUUC  AGAU  UGU  GUU  C
  ||||||  ||||  |||  |||
  CCAAAG  UCUA  AUA  UAA  U
UC      GA    --   GU   UA
Stem-loop sequence GGUUUCAAGAUUCUGUUGGUUUGCUAUAAUUGAUAAUCUAGGAAACCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286328.1
ncRNA:22   UCCCAAAGGAUCUAAUAGUUAA   1
  ||*|||||||||||||||||||
targets:1614   AGAGUUUCCUAGAUUAUCAAUU   1635

0.0 Glycine max cDNA, clone: GMFL01-26-C20 NA coding protein psRNATarget
XM_003520775.3
ncRNA:22   UCCCAAAGGAUCUAAUAGUUAA   1
  ||||||||||||||*|||||||
targets:139   AGGGUUUCCUAGAUGAUCAAUU   160

1.5 PREDICTED: Glycine max histidine-containing phosphotransfer protein 1-like (LOC100787544), mRNA histidine-containing phosphotransfer protein 1-like(LOC100787544) coding protein psRNATarget
XM_014774663.1
ncRNA:22   UCCCAAAGGAUCUAAUAGUUAA   1
  |*|||||=|||||||||=||||
targets:594   AAGGUUUUCUAGAUUAUUAAUU   615

2.5 PREDICTED: Glycine max probable calcium-binding protein CML25/26 (LOC100805239), mRNA probable calcium-binding protein CML25/26(LOC100805239) coding protein psRNATarget