Search result

BaseInfo

ncRNA ID novel_gma_miR7281
Species Glycine max
Class miRNA
Genome position Chr1:8919036-8919093 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 24
Mature sequence(if miRNA) 1 - UUCUGGAAAUGUAUUUUUGGAACU - 24
Stem-loop(if miRNA) --   UG   A        UG        
  UUC  GAA UGUAUUUU  GAACUAUAA
  |||  ||| ||||||||  ||||||||U
  AAG  UUU AUAUAAAG  CUUGAUAUA
AU   GU   -        GU        
Stem-loop sequence UUCUGGAAAUGUAUUUUUGGAACUAUAAUAUAUAGUUCUGGAAAUAUAUUUUGGAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001248115.1
ncRNA:24   UCAAGGUUUUUAUGUAAAGGUCUU   1
  |||-|||=|*=|||||||||||||
targets:258   AGU-CCAGAUGUACAUUUCCAGAA   280

3.0 Glycine max uncharacterized LOC100306438 (LOC100306438), mRNA uncharacterized LOC100306438(LOC100306438) coding protein psRNATarget
BT090543.1
ncRNA:24   UCAAGGUUUUUAUGUAAAGGUCUU   1
  |||-|||=|*=|||||||||||||
targets:258   AGU-CCAGAUGUACAUUUCCAGAA   280

3.0 Soybean clone JCVI-FLGm-4B20 unknown mRNA NA coding protein psRNATarget
XM_003534446.3
ncRNA:24   UCAAGGUUUUUAUGUAAAGGUCUU   1
  |||-|||=|*=|||||||||||||
targets:268   AGU-CCAGAUGUACAUUUCCAGAA   290

3.0 PREDICTED: Glycine max acyl carrier protein 1, mitochondrial-like (LOC100818873), mRNA acyl carrier protein 1, mitochondrial-like(LOC100818873) coding protein psRNATarget