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BaseInfo

ncRNA ID novel_gma_miR7273
Species Glycine max
Class miRNA
Genome position Chr1:48658641-48658809 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 24
Mature sequence(if miRNA) 146 - AUAAAACAACAUCGAUUUUUAGGA - 169
Stem-loop(if miRNA) --AU            A     A   A      C  UA    C             CAA     A                 GU
    AAAACAACAUCG UUUUU GGA AAUCGA GU  UUUU UUCUUACCAACAU   UUUUU GGAAAAUCGAUGUUGUU  U
    |||||||||||| ||||| ||| |||||| ||  |||| |||||||||||||   ||||| |||||||||||||||||  U
    UUUUGUUGUAGC AAAAA CUU UUGGUU CA  AAAA AAGAAUGGUUGUA   AAAAA CUUUUUAGUUACAACAG  A
CGUU            C     A   A      A  GC    U             ACC     A                 UC
Stem-loop sequence AUAAAACAACAUCGAUUUUUAGGAAAAUCGACGUUAUUUUCUUCUUACCAACAUCAAUUUUUAGGAAAAUCGAUGUUGUUGUUUACUGACAACAUUGAUUUUUCAAAAAACCAAUGUUGGUAAGAAUAAAACGACAUUGGUUAUUCAAAAAACCGAUGUUGUUUUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554076.3
ncRNA:24   AGGAUUUUUAGCUACAACAAAAUA   1
  |||--||=||=||||||||||||*
targets:559   UCC--AAGAUUGAUGUUGUUUUAC   580

3.0 PREDICTED: Glycine max DNA gyrase subunit B, chloroplastic/mitochondrial-like (LOC100807172), mRNA DNA gyrase subunit B, chloroplastic/mitochondrial-like(LOC100807172) coding protein psRNATarget