ncRNA ID | novel_gma_miR7269 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:17251583-17251684 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 22 |
Mature sequence(if miRNA) | 81 - UCAAAUAACCGUCUUAGAAAGU - 102 |
Stem-loop(if miRNA) |
--                      CUUUUAUUGU          A          A   UCAAAUAACCGUCUUAGAAAGU          GUAUAUUCUA GACGGUUAUU A   ||||||||||||||||||||||          |||||||||| ||||||||||   AGUUUAUUGGCAGAAUCUUUCA          CAUGUAAGAU CUGUCAGUAA G AA                      ----------          C          A |
Stem-loop sequence | UCAAAUAACCGUCUUAGAAAGUCUUUUAUUGUGUAUAUUCUAAGACGGUUAUUAAGAAAUGACUGUCCUAGAAUGUACACUUUCUAAGACGGUUAUUUGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773514.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget | |||||||||
XM_014771087.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_006583565.2 |
|
3.0 | PREDICTED: Glycine max UPF0503 protein At3g09070, chloroplastic-like (LOC100799446), mRNA | UPF0503 protein At3g09070, chloroplastic-like(LOC100799446) | coding protein | psRNATarget |