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BaseInfo

ncRNA ID novel_gma_miR7269
Species Glycine max
Class miRNA
Genome position Chr9:17251583-17251684 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 81 - UCAAAUAACCGUCUUAGAAAGU - 102
Stem-loop(if miRNA) --                      CUUUUAUUGU          A          A
  UCAAAUAACCGUCUUAGAAAGU          GUAUAUUCUA GACGGUUAUU A
  ||||||||||||||||||||||          |||||||||| ||||||||||
  AGUUUAUUGGCAGAAUCUUUCA          CAUGUAAGAU CUGUCAGUAA G
AA                      ----------          C          A
Stem-loop sequence UCAAAUAACCGUCUUAGAAAGUCUUUUAUUGUGUAUAUUCUAAGACGGUUAUUAAGAAAUGACUGUCCUAGAAUGUACACUUUCUAAGACGGUUAUUUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773514.1
ncRNA:22   UGAAAGAUUCUGCCAAUAAACU   1
  ||*||||||||||||||||||=
targets:268   ACAUUCUAAGACGGUUAUUUGG   289

1.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget
XM_014771087.1
ncRNA:22   UGAAAGAUUCUGCCAAUAAACU   1
  ||*|||||||||||||*|||||
targets:2513   ACAUUCUAAGACGGUUCUUUGA   2534

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_006583565.2
ncRNA:22   UGAAAGAUUCUGCCAAUAAACU   1
  =|||*||==|||||||||||||
targets:1331   GCUUCCUGGGACGGUUAUUUGA   1352

3.0 PREDICTED: Glycine max UPF0503 protein At3g09070, chloroplastic-like (LOC100799446), mRNA UPF0503 protein At3g09070, chloroplastic-like(LOC100799446) coding protein psRNATarget