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BaseInfo

ncRNA ID novel_gma_miR7268
Species Glycine max
Class miRNA
Genome position Chr9:36947989-36948130 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 20
Mature sequence(if miRNA) 123 - UGAAUAACCGUCUUAAAAUG - 142
Stem-loop(if miRNA) --               A   G         C         C                  -   -----    C
  UGAAUAACCGUCUUA AAU UCUUAUUUU UAAGACGGU AUUUAAGAACCGUCUUAG AUG     GUCG A
  ||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||| |||     |||| U
  AUUUAUUGGCAGAAU UUA AGAAUAAAA AUUCUGCCA UAAGUUCUUGGCAGAAUC UAC     UAGU G
GA               C   A         -         A                  A   AACAU    C
Stem-loop sequence UGAAUAACCGUCUUAAAAUGUCUUAUUUUCUAAGACGGUCAUUUAAGAACCGUCUUAGAUGGUCGCAUGCUGAUUACAACAUACUAAGACGGUUCUUGAAUAACCGUCUUAAAAAUAAGAAAUUCUAAGACGGUUAUUUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006599236.2
ncRNA:20   GUAAAAUUCUGCCAAUAAGU   1
  ||||||||||||||||||*|
targets:480   CAUUUUAAGACGGUUAUUGA   499

1.5 PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA uncharacterized LOC100788736(LOC100788736) coding protein psRNATarget