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BaseInfo

ncRNA ID novel_gma_miR7254
Species Glycine max
Class miRNA
Genome position Chr6:37199666-37199726 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 24
Mature sequence(if miRNA) 1 - ACUUUCAACAUCGGUUUUAGAGCC - 24
Stem-loop(if miRNA) --                --    A  CAAU
  ACUUUCAACAUCGGUU  UUAG GC    G
  ||||||||||||||||  |||| ||    U
  UGAAAGUUGUAGCCAA  AAUC CG    A
UG                UA    C  UAAG
Stem-loop sequence ACUUUCAACAUCGGUUUUAGAGCCAAUGUAGAAUGCCCUAAAUAACCGAUGUUGAAAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774861.1
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|||=||*||||||||||||*
targets:1262   UGCUGACUAGAAACGAUGUUGAAAGC   1287

3.0 PREDICTED: Glycine max uncharacterized LOC106798441 (LOC106798441), transcript variant X3, mRNA uncharacterized LOC106798441(LOC106798441) coding protein psRNATarget
XM_014774861.1
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|*|=||*|||||||||||||
targets:1219   UGCUGGCGAGAAACGAUGUUGAAAGU   1244

3.0 PREDICTED: Glycine max uncharacterized LOC106798441 (LOC106798441), transcript variant X3, mRNA uncharacterized LOC106798441(LOC106798441) coding protein psRNATarget
XM_006585358.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|||=||*||||||||||||*
targets:1321   UGCUGACUAGAAACGAUGUUGAAAGC   1346

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X4, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585358.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|*|=||*|||||||||||||
targets:1364   UGCUGGCGAGAAACGAUGUUGAAAGU   1389

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X4, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585356.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|||=||*||||||||||||*
targets:1387   UGCUGACUAGAAACGAUGUUGAAAGC   1412

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X2, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585356.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|*|=||*|||||||||||||
targets:1430   UGCUGGCGAGAAACGAUGUUGAAAGU   1455

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X2, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585357.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|||=||*||||||||||||*
targets:1534   UGCUGACUAGAAACGAUGUUGAAAGC   1559

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X3, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585357.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|*|=||*|||||||||||||
targets:1577   UGCUGGCGAGAAACGAUGUUGAAAGU   1602

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X3, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585355.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|||=||*||||||||||||*
targets:1585   UGCUGACUAGAAACGAUGUUGAAAGC   1610

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X1, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget
XM_006585355.2
ncRNA:24   CCGA--GAUUUUGGCUACAACUUUCA   1
  *|||--|*|=||*|||||||||||||
targets:1628   UGCUGGCGAGAAACGAUGUUGAAAGU   1653

3.0 PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X1, mRNA high affinity sulfate transporter 2-like(LOC100815818) coding protein psRNATarget