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BaseInfo

ncRNA ID novel_gma_miR7252
Species Glycine max
Class miRNA
Genome position Chr6:19028391-19028464 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 19
Mature sequence(if miRNA) 1 - UUGUCAUGACAUUAAGAAU - 19
Stem-loop(if miRNA) --     AU  -  UU     UU UAU   GUG UUUU
  UUGUC  GA CA  AAGAA  U   GCA   C    G
  |||||  || ||  |||||  |   |||   |    A
  AACGG  CU GU  UUUUU  A   CGU   G    C
AA     --  A  UU     UU UCU   AUA UUUA
Stem-loop sequence UUGUCAUGACAUUAAGAAUUUUAUGCAGUGCUUUUGACAUUUGAUAUGCUCUAUUUUUUUUUUGAUCGGCAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541355.3
ncRNA:19   UAAGAAUUACAGUACUGUU   1
  |||=**|||||||||||||
targets:1902   AUUUGAAAUGUCAUGACAA   1920

3.0 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100799058), transcript variant X2, mRNA protein IQ-DOMAIN 1-like(LOC100799058) coding protein psRNATarget
XM_006594059.2
ncRNA:19   UAAGAAUUACAGUACUGUU   1
  |||=**|||||||||||||
targets:1938   AUUUGAAAUGUCAUGACAA   1956

3.0 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100799058), transcript variant X1, mRNA protein IQ-DOMAIN 1-like(LOC100799058) coding protein psRNATarget