ncRNA ID | novel_gma_miR7244 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:6796859-6796967 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 19 |
Mature sequence(if miRNA) | 91 - UUAAUUUUAUAUAGUAGAU - 109 |
Stem-loop(if miRNA) |
--      --        UA      AAU       A        UAUGGU      G   UUAAUU  UUAUAUAG  GAUUAA   UAAUUUA AUUUUUUA      AGAUUA G   ||||||  ||||||||  ||||||   ||||||| ||||||||      ||||||   GAUUAG  AGUAUAUU  UUAAUU   AUUGAAU UAAAGGAU      UUUGAU A AG      AU        --      ---       G        UUUGAU      A |
Stem-loop sequence | UUAAUUUUAUAUAGUAGAUUAAAAUUAAUUUAAAUUUUUUAUAUGGUAGAUUAGGAAUAGUUUUAGUUUUAGGAAAUGUAAGUUAUUAAUUUUAUAUGAUAGAUUAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT099205.1 |
|
2.5 | Soybean clone JCVI-FLGm-23P23 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006600527.2 |
|
3.0 | PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X1, mRNA | transcription factor TCP17(LOC102670246) | coding protein | psRNATarget | |||||||||
XM_006600528.2 |
|
3.0 | PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X3, mRNA | transcription factor TCP17(LOC102670246) | coding protein | psRNATarget | |||||||||
XM_006600526.2 |
|
3.0 | PREDICTED: Glycine max transcription factor TCP17 (LOC102670246), transcript variant X2, mRNA | transcription factor TCP17(LOC102670246) | coding protein | psRNATarget |