ncRNA ID | novel_gma_miR7243 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:8253390-8253490 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 22 |
Mature sequence(if miRNA) | 80 - AAAGGACUCCAUUGCUGAAGAA - 101 |
Stem-loop(if miRNA) |
---       UC    GCU         CCAAG  -  -ACA   UCCAUAUGGA    AAAGGAC  CAUU   GAAGAAGAU     GC CU    AGC          G    |||||||  ||||   |||||||||     || ||    |||    UUUCUUG  GUGG   CUUCUUCUA     CG GA    UGG          C CGU       UA    -AU         -----  A  ACUA   CGUACUACAU |
Stem-loop sequence | AAAGGACUCCAUUGCUGAAGAAGAUCCAAGGCCUACAAGCUCCAUAUGGAGCUACAUCAUGCGGUAUCAAGAGCAUCUUCUUCUAGGUGAUGUUCUUUUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098985.1 |
|
2.5 | Soybean clone JCVI-FLGm-16F8 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014771148.1 |
|
2.5 | PREDICTED: Glycine max putative quinone-oxidoreductase homolog, chloroplastic (LOC100782744), transcript variant X2, mRNA | putative quinone-oxidoreductase homolog, chloroplastic(LOC100782744) | coding protein | psRNATarget | |||||||||
XM_014771147.1 |
|
2.5 | PREDICTED: Glycine max putative quinone-oxidoreductase homolog, chloroplastic (LOC100782744), transcript variant X1, mRNA | putative quinone-oxidoreductase homolog, chloroplastic(LOC100782744) | coding protein | psRNATarget |