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BaseInfo

ncRNA ID novel_gma_miR7243
Species Glycine max
Class miRNA
Genome position Chr5:8253390-8253490 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 80 - AAAGGACUCCAUUGCUGAAGAA - 101
Stem-loop(if miRNA) ---       UC    GCU         CCAAG  -  -ACA   UCCAUAUGGA
   AAAGGAC  CAUU   GAAGAAGAU     GC CU    AGC          G
   |||||||  ||||   |||||||||     || ||    |||
   UUUCUUG  GUGG   CUUCUUCUA     CG GA    UGG          C
CGU       UA    -AU         -----  A  ACUA   CGUACUACAU
Stem-loop sequence AAAGGACUCCAUUGCUGAAGAAGAUCCAAGGCCUACAAGCUCCAUAUGGAGCUACAUCAUGCGGUAUCAAGAGCAUCUUCUUCUAGGUGAUGUUCUUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098985.1
ncRNA:22   AAGAAGUCGUUACCUCAGGAAA   1
  |||||||*|||||||*||||||
targets:207   UUCUUCAUCAAUGGAUUCCUUU   228

2.5 Soybean clone JCVI-FLGm-16F8 unknown mRNA NA coding protein psRNATarget
XM_014771148.1
ncRNA:22   AAGAAGUCGUUACCUCAGGAAA   1
  |||||||*|||||||*||||||
targets:1453   UUCUUCAUCAAUGGAUUCCUUU   1474

2.5 PREDICTED: Glycine max putative quinone-oxidoreductase homolog, chloroplastic (LOC100782744), transcript variant X2, mRNA putative quinone-oxidoreductase homolog, chloroplastic(LOC100782744) coding protein psRNATarget
XM_014771147.1
ncRNA:22   AAGAAGUCGUUACCUCAGGAAA   1
  |||||||*|||||||*||||||
targets:1587   UUCUUCAUCAAUGGAUUCCUUU   1608

2.5 PREDICTED: Glycine max putative quinone-oxidoreductase homolog, chloroplastic (LOC100782744), transcript variant X1, mRNA putative quinone-oxidoreductase homolog, chloroplastic(LOC100782744) coding protein psRNATarget