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BaseInfo

ncRNA ID novel_gma_miR7234
Species Glycine max
Class miRNA
Genome position Chr1:48011406-48011530 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 1 - CUUCCGGAUGAACAAAUUGUUC - 22
Stem-loop(if miRNA) --       AU   C         AU             CUU UA     U          A
  CUUCCGG  GAA AAAUUGUUC  CCAGAAGAACCUU   C  GAGAA UUAUCGGAAG A
  |||||||  ||| |||||||||  |||||||||||||   |  ||||| |||||||||| C
  GAAGGCC  CUU UUUAACAAG  GGUUUUCUUGGAA   G  UUCUU GAUGGCCUUC U
AA       AU   A         AU             AAU GC     C          U
Stem-loop sequence CUUCCGGAUGAACAAAUUGUUCAUCCAGAAGAACCUUCUUCUAGAGAAUUUAUCGGAAGAACUUCUUCCGGUAGCUUCUUCGGUAAAAGGUUCUUUUGGUAGAACAAUUUAUUCUACCGGAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588641.2
ncRNA:22   CUUGUUAAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:162   GAAGAACUUGUUCAUCCGGAAA   183

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X1, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget
XM_006588642.2
ncRNA:22   CUUGUUAAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:173   GAAGAACUUGUUCAUCCGGAAA   194

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X2, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget