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BaseInfo

ncRNA ID novel_gma_miR7232
Species Glycine max
Class miRNA
Genome position Chr3:16352750-16352814 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 24
Mature sequence(if miRNA) 42 - UUCUAAGACGGUUUUUGAAAGAAC - 65
Stem-loop(if miRNA) --                       C   U  
  UCUUUCAAAAACUGUCUUGGAAG AUU UCU
  ||||||||||||||||||||||| ||| ||A
  AGAAAGUUUUUGGCAGAAUCUUC UAG AGA
CA                       A   C  
Stem-loop sequence UCUUUCAAAAACUGUCUUGGAAGCAUUUUCUAAGACGAUACUUCUAAGACGGUUUUUGAAAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAAGAAAGUUUUUGGCAGAAUCUU   1
  |||||||*||||||||||||||||
targets:2526   GUUCUUUGAAAAACCGUCUUAGAA   2549

1.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_006601444.1
ncRNA:24   CAAGAAAGUUUUUGGCAGAAUCUU   1
  ***=||||=|||||||||||*|||
targets:804   UGGUUUUCGAAAACCGUCUUUGAA   827

2.5 PREDICTED: Glycine max splicing factor 3B subunit 2-like (LOC102663030), mRNA splicing factor 3B subunit 2-like(LOC102663030) coding protein psRNATarget
XM_003544705.3
ncRNA:21   GAAAGUUUUUGGCAGAAUCUU   1
  =|||*||||||||||||*|||
targets:1   UUUUAAAAAACCGUCUUUGAA   21

2.5 PREDICTED: Glycine max 60S ribosomal protein L10-like (LOC100809571), mRNA 60S ribosomal protein L10-like(LOC100809571) coding protein psRNATarget
XM_014763138.1
ncRNA:24   CAAGAAAGUUUUUGGCAGAAUCUU   1
  |||=|||*=|=|||||||||||||
targets:1424   GUUUUUUAGAGAACCGUCUUAGAA   1447

3.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   CAAGAAAGUUUUUGGCAGAAUCUU   1
  |||=|||*=|=|||||||||||||
targets:2133   GUUUUUUAGAGAACCGUCUUAGAA   2156

3.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget