Search result

BaseInfo

ncRNA ID	novel_gma_miR7227
Species	Glycine max
Class	miRNA
Genome position	Chr2:18663165-18663220 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451609
Length	22
Mature sequence(if miRNA)	1 - CUCCGUUGGAGCUUGUAGGCCU - 22
Stem-loop(if miRNA)	--      U    C UG A  CCU   A   CUCCGU GGAG U  U GG   AGG U   |||||| |||| |  | ||   |||   GAGGUA CCUU G  A CU   UCU C AG      U    A GU A  ACU   U
Stem-loop sequence	CUCCGUUGGAGCUUGUAGGCCUAGGAUCUUCUUCAUCAAUGGAUUCCUAUGGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006587611.2	ncRNA:22   UCCGGAUGUUCGAGGUUGCCUC   1   |||||||||||||||||=|||| targets:78   AGGCCUACAAGCUCCAAUGGAG   99 Target Full Sequence	1.5	PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X1, mRNA	maltose excess protein 1, chloroplastic-like(LOC102668505)	coding protein	psRNATarget
XM_006587612.2	ncRNA:22   UCCGGAUGUUCGAGGUUGCCUC   1   |||||||||||||||||=|||| targets:73   AGGCCUACAAGCUCCAAUGGAG   94 Target Full Sequence	1.5	PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X2, mRNA	maltose excess protein 1, chloroplastic-like(LOC102668505)	coding protein	psRNATarget
BT095722.1	ncRNA:22   UCCGGAUGUUCGAGGUUGCCUC   1   |||||||||||||||||=|||| targets:105   AGGCCUACAAGCUCCAAUGGAG   126 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-15I19 unknown mRNA	NA	coding protein	psRNATarget
AK286453.1	ncRNA:22   UCCGGAUGUUCGAGGUUGCCUC   1   |||||||=|||||||||=|||| targets:1559   AGGCCUAUAAGCUCCAAUGGAG   1580 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-28-L19	NA	coding protein	psRNATarget