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BaseInfo

ncRNA ID novel_gma_miR7222
Species Glycine max
Class miRNA
Genome position Chr2:40929311-40929437 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609;SRR1451624
Length 21
Mature sequence(if miRNA) 107 - UACAUGAAUGCAUCCUAACUU - 127
Stem-loop(if miRNA) --        A        CAU   UA     AUC    G          C   A   G   UUU
  GUUAGGGU CAUUCAUG   CUU  UAUGU   CUUU GAUCCGAACA AUU UGU UCC   C
  |||||||| ||||||||   |||  |||||   |||| |||||||||| ||| ||| |||
  CAAUCCUA GUAAGUAC   GAA  AUACA   GAAA CUAGGUUUGU UAA ACA AGG   G
UU        C        AUC   -C     -CA    A          U   A   -   CUA
Stem-loop sequence GUUAGGGUACAUUCAUGCAUCUUUAUAUGUAUCCUUUGGAUCCGAACACAUUAUGUGUCCUUUCGAUCGGAACAAAAUUUGUUUGGAUCAAAAGACACAUACAAGCUACAUGAAUGCAUCCUAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546214.3
ncRNA:21   UUCAAUCCUACGUAAGUACAU   1
  =||||||*||||||*||||||
targets:1384   GAGUUAGCAUGCAUGCAUGUA   1404

2.5 PREDICTED: Glycine max ADP-ribosylation factor GTPase-activating protein AGD12-like (LOC100810806), mRNA ADP-ribosylation factor GTPase-activating protein AGD12-like(LOC100810806) coding protein psRNATarget