ncRNA ID | novel_gma_miR7222 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:40929311-40929437 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609;SRR1451624 |
Length | 21 |
Mature sequence(if miRNA) | 107 - UACAUGAAUGCAUCCUAACUU - 127 |
Stem-loop(if miRNA) |
--        A        CAU   UA     AUC    G          C   A   G   UUU   GUUAGGGU CAUUCAUG   CUU  UAUGU   CUUU GAUCCGAACA AUU UGU UCC   C   |||||||| ||||||||   |||  |||||   |||| |||||||||| ||| ||| |||   CAAUCCUA GUAAGUAC   GAA  AUACA   GAAA CUAGGUUUGU UAA ACA AGG   G UU        C        AUC   -C     -CA    A          U   A   -   CUA |
Stem-loop sequence | GUUAGGGUACAUUCAUGCAUCUUUAUAUGUAUCCUUUGGAUCCGAACACAUUAUGUGUCCUUUCGAUCGGAACAAAAUUUGUUUGGAUCAAAAGACACAUACAAGCUACAUGAAUGCAUCCUAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003546214.3 |
|
2.5 | PREDICTED: Glycine max ADP-ribosylation factor GTPase-activating protein AGD12-like (LOC100810806), mRNA | ADP-ribosylation factor GTPase-activating protein AGD12-like(LOC100810806) | coding protein | psRNATarget |