ncRNA ID | novel_gma_miR7221 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:25397337-25397522 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUUUCCCAGUGAUCACCAAAGG - 22 |
Stem-loop(if miRNA) |
--       A                         A                 G CAUCA                     AUA      AGAU   CUUUCCC GUGAUCACCAAAGGCUUCUGCAUCA CAUUGACACUCUUCACC U     UGCUUUAUGCUUCUGUGCUGC   AAUCUC    U   ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |     |||||||||||||||||||||   ||||||   GAAAGGG CACUAGUGGUUUCCGAAGACGUAGU GUAACUGUGAGAGGUGG A     ACGAAAUACGAAGACACGACG   UUGGAG    U UU       C                         C                 G --AAA                     ACG      AUUA |
Stem-loop sequence | CUUUCCCAGUGAUCACCAAAGGCUUCUGCAUCAACAUUGACACUCUUCACCGUCAUCAUGCUUUAUGCUUCUGUGCUGCAUAAAUCUCAGAUUUAUUAGAGGUUGCAGCAGCACAGAAGCAUAAAGCAAAAAGGGUGGAGAGUGUCAAUGCUGAUGCAGAAGCCUUUGGUGAUCACCGGGAAAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014764387.1 |
|
1.5 | PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 4-like (LOC100812737), mRNA | SNF2 domain-containing protein CLASSY 4-like(LOC100812737) | coding protein | psRNATarget |