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BaseInfo

ncRNA ID novel_gma_miR7221
Species Glycine max
Class miRNA
Genome position Chr20:25397337-25397522 [+]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 22
Mature sequence(if miRNA) 1 - CUUUCCCAGUGAUCACCAAAGG - 22
Stem-loop(if miRNA) --       A                         A                 G CAUCA                     AUA      AGAU
  CUUUCCC GUGAUCACCAAAGGCUUCUGCAUCA CAUUGACACUCUUCACC U     UGCUUUAUGCUUCUGUGCUGC   AAUCUC    U
  ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |     |||||||||||||||||||||   ||||||
  GAAAGGG CACUAGUGGUUUCCGAAGACGUAGU GUAACUGUGAGAGGUGG A     ACGAAAUACGAAGACACGACG   UUGGAG    U
UU       C                         C                 G --AAA                     ACG      AUUA
Stem-loop sequence CUUUCCCAGUGAUCACCAAAGGCUUCUGCAUCAACAUUGACACUCUUCACCGUCAUCAUGCUUUAUGCUUCUGUGCUGCAUAAAUCUCAGAUUUAUUAGAGGUUGCAGCAGCACAGAAGCAUAAAGCAAAAAGGGUGGAGAGUGUCAAUGCUGAUGCAGAAGCCUUUGGUGAUCACCGGGAAAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764387.1
ncRNA:22   GGAAACCACUAGUGACCCUUUC   1
  =||||||||||||||||*||||
targets:798   UCUUUGGUGAUCACUGGAAAAG   819

1.5 PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 4-like (LOC100812737), mRNA SNF2 domain-containing protein CLASSY 4-like(LOC100812737) coding protein psRNATarget