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BaseInfo

ncRNA ID novel_gma_miR7218
Species Glycine max
Class miRNA
Genome position Chr20:11468860-11469001 [-]
Reference genome Glycine_max_v2.0
Source SRR1451609
Length 24
Mature sequence(if miRNA) 1 - AAGAAAUGGAGGGAAAAAAGAUGA - 24
Stem-loop(if miRNA) AUU   -C        A          --   C    C   ---     C        UCACCUUUCUUAAAG
   UCU  UUUCUCUC AUUUCUUUCA  UCA UAAG UUU   UGAGA AAUAAAUA               U
   |||  |||||||| ||||||||||  ||| |||| |||   ||||| ||||||||               A
   AGA  AAAGGGAG UAAAGAAAGU  AGU AUUC AAA   AUUCU UUAUUUAU               U
AGU   AA        G          AA   -    A   AUU     A        UUUACCUCUACUAUG
Stem-loop sequence AUUUCUCUUUCUCUCAAUUUCUUUCAUCACUAAGCUUUUGAGACAAUAAAUAUCACCUUUCUUAAAGUAUGUAUCAUCUCCAUUUUAUUUAUUAUCUUAUUAAAAACUUAUGAAAUGAAAGAAAUGGAGGGAAAAAAGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526723.3
ncRNA:24   AGUAGAAAAAAGGGAGGUAAAGAA   1
  |==|=||||||*||||||||||||
targets:2029   UUGUUUUUUUUGCCUCCAUUUCUU   2052

1.5 PREDICTED: Glycine max NAC domain-containing protein 14 (LOC100808469), mRNA NAC domain-containing protein 14(LOC100808469) coding protein psRNATarget
AK246041.1
ncRNA:24   AGUAGAAAAAAGGGAGGUAAAGAA   1
  |==|=||||||*||||||||||||
targets:2022   UUGUUUUUUUUGCCUCCAUUUCUU   2045

1.5 Glycine max cDNA, clone: GMFL01-49-I24 NA coding protein psRNATarget
BT093876.1
ncRNA:24   AGUAGAAAAAAGGGAGGUAAAGAA   1
  |==|=||||||*||||||||||||
targets:853   UUGUUUUUUUUGCCUCCAUUUCUU   876

1.5 Soybean clone JCVI-FLGm-17L6 unknown mRNA NA coding protein psRNATarget