ncRNA ID | novel_gma_miR7218 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:11468860-11469001 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451609 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAAAUGGAGGGAAAAAAGAUGA - 24 |
Stem-loop(if miRNA) |
AUU   -C        A          --   C    C   ---     C        UCACCUUUCUUAAAG    UCU  UUUCUCUC AUUUCUUUCA  UCA UAAG UUU   UGAGA AAUAAAUA               U    |||  |||||||| ||||||||||  ||| |||| |||   ||||| ||||||||               A    AGA  AAAGGGAG UAAAGAAAGU  AGU AUUC AAA   AUUCU UUAUUUAU               U AGU   AA        G          AA   -    A   AUU     A        UUUACCUCUACUAUG |
Stem-loop sequence | AUUUCUCUUUCUCUCAAUUUCUUUCAUCACUAAGCUUUUGAGACAAUAAAUAUCACCUUUCUUAAAGUAUGUAUCAUCUCCAUUUUAUUUAUUAUCUUAUUAAAAACUUAUGAAAUGAAAGAAAUGGAGGGAAAAAAGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003526723.3 |
|
1.5 | PREDICTED: Glycine max NAC domain-containing protein 14 (LOC100808469), mRNA | NAC domain-containing protein 14(LOC100808469) | coding protein | psRNATarget | |||||||||
AK246041.1 |
|
1.5 | Glycine max cDNA, clone: GMFL01-49-I24 | NA | coding protein | psRNATarget | |||||||||
BT093876.1 |
|
1.5 | Soybean clone JCVI-FLGm-17L6 unknown mRNA | NA | coding protein | psRNATarget |