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BaseInfo

ncRNA ID novel_gma_miR7212
Species Glycine max
Class miRNA
Genome position Chr9:39110930-39111005 [+]
Reference genome Glycine_max_v2.0
Source SRR1451608
Length 23
Mature sequence(if miRNA) 1 - UUAAAUGGAUUGGAUCUUAAAUC - 23
Stem-loop(if miRNA) --UU                       CAUUCA     U
    AAAUGGAUUGGAUCUUAAAUCUA      UAUUU U
    |||||||||||||||||||||||      ||||| U
    UUUACCUAACCUAGAAUUUAGGU      AUAAA U
UAAC                       ---UUG     U
Stem-loop sequence UUAAAUGGAUUGGAUCUUAAAUCUACAUUCAUAUUUUUUUUAAAUAGUUUGGAUUUAAGAUCCAAUCCAUUUCAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762028.1
ncRNA:23   CUAAAUUCUAGGUUAGGUAAAUU   1
  |||||||*||||||*||||||||
targets:3813   GAUUUAAAAUCCAAACCAUUUAA   3835

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g21300-like (LOC100806592), transcript variant X4, mRNA pentatricopeptide repeat-containing protein At4g21300-like(LOC100806592) coding protein psRNATarget
XM_014762026.1
ncRNA:23   CUAAAUUCUAGGUUAGGUAAAUU   1
  |||||||*||||||*||||||||
targets:4152   GAUUUAAAAUCCAAACCAUUUAA   4174

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g21300-like (LOC100806592), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At4g21300-like(LOC100806592) coding protein psRNATarget
XM_014762027.1
ncRNA:23   CUAAAUUCUAGGUUAGGUAAAUU   1
  |||||||*||||||*||||||||
targets:5393   GAUUUAAAAUCCAAACCAUUUAA   5415

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g21300-like (LOC100806592), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At4g21300-like(LOC100806592) coding protein psRNATarget
XM_006587056.2
ncRNA:23   CUAAAUUCUAGGUUAGGUAAAUU   1
  |||||||*||||||*||||||||
targets:5393   GAUUUAAAAUCCAAACCAUUUAA   5415

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g21300-like (LOC100806592), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At4g21300-like(LOC100806592) coding protein psRNATarget