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BaseInfo

ncRNA ID novel_gma_miR7208
Species Glycine max
Class miRNA
Genome position Chr7:44133968-44134021 [-]
Reference genome Glycine_max_v2.0
Source SRR1451608;SRR1451618
Length 24
Mature sequence(if miRNA) 31 - AUUGGUCAGGACUAUUUUUUAGCC - 54
Stem-loop(if miRNA) --           CUAU       C AA
  AUUGGUCAGGA    UUUUUAG C  C
  |||||||||||    ||||||| |
  UAACCAGUUUU    AGGGAUC G  U
UG           --UU       A CU
Stem-loop sequence AUUGGUCAGGACUAUUUUUUAGCCAACUUCGACUAGGGAUUUUUUGACCAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765741.1
ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1
  *****|||||||||=|||||||||
targets:1093   AAAAUAAAAAUAGUUCUGACCAAU   1116

1.5 PREDICTED: Glycine max FIP1[III]-like protein (LOC106795505), mRNA FIP1[III]-like protein(LOC106795505) coding protein psRNATarget
XM_006597641.2
ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1
  *****=||||||||=|||||||||
targets:3248   AAAAUGAAAAUAGUUCUGACCAAU   3271

2.5 PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X4, mRNA FIP1[III]-like protein(LOC100816009) coding protein psRNATarget
XM_006597640.2
ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1
  *****=||||||||=|||||||||
targets:3248   AAAAUGAAAAUAGUUCUGACCAAU   3271

2.5 PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X3, mRNA FIP1[III]-like protein(LOC100816009) coding protein psRNATarget
XM_014768179.1
ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1
  *****=||||||||=|||||||||
targets:3252   AAAAUGAAAAUAGUUCUGACCAAU   3275

2.5 PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X2, mRNA FIP1[III]-like protein(LOC100816009) coding protein psRNATarget
XM_006597639.2
ncRNA:24   CCGAUUUUUUAUCAGGACUGGUUA   1
  *****=||||||||=|||||||||
targets:3257   AAAAUGAAAAUAGUUCUGACCAAU   3280

2.5 PREDICTED: Glycine max FIP1[III]-like protein (LOC100816009), transcript variant X1, mRNA FIP1[III]-like protein(LOC100816009) coding protein psRNATarget