ncRNA ID | novel_gma_miR7201 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:33464149-33464369 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451608 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UACAAAUAAAUAAUGGAUUGUACU - 24 |
Stem-loop(if miRNA) |
--UAC                                                  ------                                --A   CCAACUCAAAACAGU      AAAUAAAUAAUGGAUUGUACUUCCUUAUUUAUUUAAUUGUCAUAUAUCCU      UAUUUAUUUACAUGGUCAUAUAUCCUUAUUUA   UUG               U      ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||   |||               A      UUUAUUUAUUACCUAACAUGAAGGAAUAAAUAAAUUAACAGUAUAUAGGA      AUAAAUAAAUGUACCAGUAUAUAGGAAUAAAU   UGU               U GUAUA                                                  UAGGUA                                AAA   CAAAUAUACUUGUAA |
Stem-loop sequence | UACAAAUAAAUAAUGGAUUGUACUUCCUUAUUUAUUUAAUUGUCAUAUAUCCUUAUUUAUUUACAUGGUCAUAUAUCCUUAUUUAAUUGCCAACUCAAAACAGUUAUAAUGUUCAUAUAAACUGUAAAUAAAUAAGGAUAUAUGACCAUGUAAAUAAAUAAUGGAUAGGAUAUAUGACAAUUAAAUAAAUAAGGAAGUACAAUCCAUUAUUUAUUUAUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534394.3 |
|
2.5 | PREDICTED: Glycine max 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like (LOC100790693), mRNA | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like(LOC100790693) | coding protein | psRNATarget |