Search result

BaseInfo

ncRNA ID novel_gma_miR7201
Species Glycine max
Class miRNA
Genome position Chr3:33464149-33464369 [+]
Reference genome Glycine_max_v2.0
Source SRR1451608
Length 24
Mature sequence(if miRNA) 1 - UACAAAUAAAUAAUGGAUUGUACU - 24
Stem-loop(if miRNA) --UAC                                                  ------                                --A   CCAACUCAAAACAGU
     AAAUAAAUAAUGGAUUGUACUUCCUUAUUUAUUUAAUUGUCAUAUAUCCU      UAUUUAUUUACAUGGUCAUAUAUCCUUAUUUA   UUG               U
     ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||   |||               A
     UUUAUUUAUUACCUAACAUGAAGGAAUAAAUAAAUUAACAGUAUAUAGGA      AUAAAUAAAUGUACCAGUAUAUAGGAAUAAAU   UGU               U
GUAUA                                                  UAGGUA                                AAA   CAAAUAUACUUGUAA
Stem-loop sequence UACAAAUAAAUAAUGGAUUGUACUUCCUUAUUUAUUUAAUUGUCAUAUAUCCUUAUUUAUUUACAUGGUCAUAUAUCCUUAUUUAAUUGCCAACUCAAAACAGUUAUAAUGUUCAUAUAAACUGUAAAUAAAUAAGGAUAUAUGACCAUGUAAAUAAAUAAUGGAUAGGAUAUAUGACAAUUAAAUAAAUAAGGAAGUACAAUCCAUUAUUUAUUUAUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534394.3
ncRNA:24   UCAUGUUAGGUAAUAAAUAAACAU   1
  ****||||||||*||||||||||*
targets:123   CUCUCAAUCCAUCAUUUAUUUGUC   146

2.5 PREDICTED: Glycine max 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like (LOC100790693), mRNA 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like(LOC100790693) coding protein psRNATarget