ncRNA ID | novel_gma_miR7196 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:44558181-44558359 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451608 |
Length | 21 |
Mature sequence(if miRNA) | 159 - GAGAUUGCAGUUGAGUAACUG - 179 |
Stem-loop(if miRNA) |
--                   A     U        U   A             C C                 AAUC  UAAUCUAUA   GUUACUCAACUGCAAUCUC GGUAG AAGUAAGC GUU GGUUAGUUAUGAC G UGUCAUAGAGACAGCGG    UA         A   ||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| | |||||||||||||||||    ||         A   CAAUGAGUUGACGUUAGAG CCAUC UUCAUUCG CAA CCAAUCAAUACUG C ACAGUAUCUCUGUCGUC    CG         U GU                   C     U        U   A             U A                 AACU  ACAAUGCAA |
Stem-loop sequence | GUUACUCAACUGCAAUCUCAGGUAGUAAGUAAGCUGUUAGGUUAGUUAUGACCGCUGUCAUAGAGACAGCGGAAUCUAUAAUCUAUAAAUAACGUAACAGCUCAACUGCUGUCUCUAUGACAACUGUCAUAACUAACCAAACUGCUUACUUUCUACCCGAGAUUGCAGUUGAGUAACUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767038.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized mitochondrial protein AtMg00810-like (LOC106795998), mRNA | uncharacterized mitochondrial protein AtMg00810-like(LOC106795998) | coding protein | psRNATarget | |||||||||
NM_001255576.2 |
|
2.5 | Glycine max GDSL esterase/lipase At5g45910-like (LOC100815771), mRNA | GDSL esterase/lipase At5g45910-like(LOC100815771) | coding protein | psRNATarget | |||||||||
BT093660.1 |
|
2.5 | Soybean clone JCVI-FLGm-24E12 unknown mRNA | NA | coding protein | psRNATarget |