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BaseInfo

ncRNA ID novel_gma_miR7196
Species Glycine max
Class miRNA
Genome position Chr19:44558181-44558359 [+]
Reference genome Glycine_max_v2.0
Source SRR1451608
Length 21
Mature sequence(if miRNA) 159 - GAGAUUGCAGUUGAGUAACUG - 179
Stem-loop(if miRNA) --                   A     U        U   A             C C                 AAUC  UAAUCUAUA
  GUUACUCAACUGCAAUCUC GGUAG AAGUAAGC GUU GGUUAGUUAUGAC G UGUCAUAGAGACAGCGG    UA         A
  ||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| | |||||||||||||||||    ||         A
  CAAUGAGUUGACGUUAGAG CCAUC UUCAUUCG CAA CCAAUCAAUACUG C ACAGUAUCUCUGUCGUC    CG         U
GU                   C     U        U   A             U A                 AACU  ACAAUGCAA
Stem-loop sequence GUUACUCAACUGCAAUCUCAGGUAGUAAGUAAGCUGUUAGGUUAGUUAUGACCGCUGUCAUAGAGACAGCGGAAUCUAUAAUCUAUAAAUAACGUAACAGCUCAACUGCUGUCUCUAUGACAACUGUCAUAACUAACCAAACUGCUUACUUUCUACCCGAGAUUGCAGUUGAGUAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767038.1
ncRNA:21   GUCAAUGAGUUGACGUUAGAG   1
  ||||||=|||||||||=||||
targets:3751   CAGUUAUUCAACUGCAGUCUC   3771

2.5 PREDICTED: Glycine max uncharacterized mitochondrial protein AtMg00810-like (LOC106795998), mRNA uncharacterized mitochondrial protein AtMg00810-like(LOC106795998) coding protein psRNATarget
NM_001255576.2
ncRNA:21   GUCAAUGAGUUGACGUUAGAG   1
  **|||||||||||*||||||*
targets:595   AUGUUACUCAACUUCAAUCUA   615

2.5 Glycine max GDSL esterase/lipase At5g45910-like (LOC100815771), mRNA GDSL esterase/lipase At5g45910-like(LOC100815771) coding protein psRNATarget
BT093660.1
ncRNA:21   GUCAAUGAGUUGACGUUAGAG   1
  **|||||||||||*||||||*
targets:597   AUGUUACUCAACUUCAAUCUA   617

2.5 Soybean clone JCVI-FLGm-24E12 unknown mRNA NA coding protein psRNATarget