ncRNA ID | novel_gma_miR7193 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:57161439-57161578 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451608 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCACGUUCUGAUUGGAUGAUGACU - 24 |
Stem-loop(if miRNA) |
--               A       UA   CA     AU          AUGA   CUUUAUG        AA   UCACGUUCUGAUUGG UGAUGAC  UCA  UGUCA  UUUUGAUUGG    CGA       GACGAUGA  U   ||||||||||||||| |||||||  |||  |||||  ||||||||||    |||       ||||||||   GGUGCGAGACUAACC GCUACUG  AGU  ACAGU  AAGACUAACU    GUU       UUGUUAUU  G AA               C       UC   AC     AC          ---G   ---ACUA        AG |
Stem-loop sequence | UCACGUUCUGAUUGGAUGAUGACUAUCACAUGUCAAUUUUUGAUUGGAUGACGACUUUAUGGACGAUGAAAUGGAUUAUUGUUAUCAUUGGUCAAUCAGAACAUGACACAUGACUGUCAUCGCCCAAUCAGAGCGUGGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |