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BaseInfo

ncRNA ID novel_gma_miR7188
Species Glycine max
Class miRNA
Genome position Chr10:40892505-40892609 [-]
Reference genome Glycine_max_v2.0
Source SRR1451608
Length 21
Mature sequence(if miRNA) 1 - UGUCGGCAAGUUGGCCUUGGC - 21
Stem-loop(if miRNA) --     AU            UU   CAAGUGA     CA                A
  CAAGG  GACUUGCCGGCA  AGC       AUGAG  UCAUAUAUAUAUAUAU U
  |||||  ||||||||||||  |||       |||||  ||||||||||||||||
  GUUCC  UUGAACGGCUGU  UUG       UACUC  AGUAUAUAUAUAUAUA A
CG     GG            UC   -------     --                U
Stem-loop sequence CAAGGAUGACUUGCCGGCAUUAGCCAAGUGAAUGAGCAUCAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUGACUCAUGUUCUUGUCGGCAAGUUGGCCUUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583281.2
ncRNA:21   CGGUUCCGGUUGAACGGCUGU   1
  *||||||*|||*|||||||||
targets:1224   UCCAAGGACAAAUUGCCGACA   1244

2.5 PREDICTED: Glycine max uncharacterized LOC100797322 (LOC100797322), transcript variant X2, mRNA uncharacterized LOC100797322(LOC100797322) coding protein psRNATarget
XM_006583279.2
ncRNA:21   CGGUUCCGGUUGAACGGCUGU   1
  *||||||*|||*|||||||||
targets:1036   UCCAAGGACAAAUUGCCGACA   1056

2.5 PREDICTED: Glycine max uncharacterized LOC100797322 (LOC100797322), transcript variant X1, mRNA uncharacterized LOC100797322(LOC100797322) coding protein psRNATarget