ncRNA ID | novel_gma_miR7188 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:40892505-40892609 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451608 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUCGGCAAGUUGGCCUUGGC - 21 |
Stem-loop(if miRNA) |
--     AU            UU   CAAGUGA     CA                A   CAAGG  GACUUGCCGGCA  AGC       AUGAG  UCAUAUAUAUAUAUAU U   |||||  ||||||||||||  |||       |||||  ||||||||||||||||   GUUCC  UUGAACGGCUGU  UUG       UACUC  AGUAUAUAUAUAUAUA A CG     GG            UC   -------     --                U |
Stem-loop sequence | CAAGGAUGACUUGCCGGCAUUAGCCAAGUGAAUGAGCAUCAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUGACUCAUGUUCUUGUCGGCAAGUUGGCCUUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583281.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100797322 (LOC100797322), transcript variant X2, mRNA | uncharacterized LOC100797322(LOC100797322) | coding protein | psRNATarget | |||||||||
XM_006583279.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100797322 (LOC100797322), transcript variant X1, mRNA | uncharacterized LOC100797322(LOC100797322) | coding protein | psRNATarget |