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BaseInfo

ncRNA ID novel_gma_miR7185
Species Glycine max
Class miRNA
Genome position Chr19:7201547-7201643 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 21
Mature sequence(if miRNA) 1 - UAGAAUCCACAACUGUAUAAC - 21
Stem-loop(if miRNA) UAGAA   ACAACU   ---  ACAAAUAUGCUGAGACAUUGACCACCAUGUGC
     UCC      GUA   UA                                A
     |||      |||   ||
     AGG      CUG   GG                                A
-----   -----U   AAG  UAACAUGUAGUUCGUGCUUCUAGAGAGGUUUU
Stem-loop sequence UAGAAUCCACAACUGUAUAACAAAUAUGCUGAGACAUUGACCACCAUGUGCAAUUUUGGAGAGAUCUUCGUGCUUGAUGUACAAUGGGAAGUCUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771500.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  |||||||||||||||||||||
targets:1754   GUUAUACAGUUGUGGAUUCUA   1774

0.0 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X2, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014771499.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  |||||||||||||||||||||
targets:1916   GUUAUACAGUUGUGGAUUCUA   1936

0.0 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X1, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014768279.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  |||||||||||||||||||||
targets:1743   GUUAUACAGUUGUGGAUUCUA   1763

0.0 PREDICTED: Glycine max uncharacterized LOC100783027 (LOC100783027), transcript variant X2, mRNA uncharacterized LOC100783027(LOC100783027) coding protein psRNATarget
XM_006591736.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:553   GUUAUACAGUUGUGGAUUCUG   573

1.0 PREDICTED: Glycine max uncharacterized LOC102669838 (LOC102669838), mRNA uncharacterized LOC102669838(LOC102669838) coding protein psRNATarget
XM_014775932.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:655   GUUAUACAGUUGUGGAUUCUG   675

1.0 PREDICTED: Glycine max uncharacterized LOC106798763 (LOC106798763), mRNA uncharacterized LOC106798763(LOC106798763) coding protein psRNATarget
XM_014761671.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:754   GUUAUACAGUUGUGGAUUCUG   774

1.0 PREDICTED: Glycine max uncharacterized LOC106794404 (LOC106794404), mRNA uncharacterized LOC106794404(LOC106794404) coding protein psRNATarget
XM_014767671.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1051   GUUAUACAGUUGUGGAUUCUG   1071

1.0 PREDICTED: Glycine max uncharacterized LOC106796113 (LOC106796113), mRNA uncharacterized LOC106796113(LOC106796113) coding protein psRNATarget
XM_014761685.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1279   GUUAUACAGUUGUGGAUUCUG   1299

1.0 PREDICTED: Glycine max uncharacterized LOC106794416 (LOC106794416), mRNA uncharacterized LOC106794416(LOC106794416) coding protein psRNATarget
XM_014767658.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1671   GUUAUACAGUUGUGGAUUCUG   1691

1.0 PREDICTED: Glycine max uncharacterized LOC106796104 (LOC106796104), mRNA uncharacterized LOC106796104(LOC106796104) coding protein psRNATarget
XM_014771679.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1737   GUUAUACAGUUGUGGAUUCUG   1757

1.0 PREDICTED: Glycine max uncharacterized LOC100802717 (LOC100802717), mRNA uncharacterized LOC100802717(LOC100802717) coding protein psRNATarget
XM_014764775.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1869   GUUAUACAGUUGUGGAUUCUG   1889

1.0 PREDICTED: Glycine max uncharacterized LOC106795347 (LOC106795347), mRNA uncharacterized LOC106795347(LOC106795347) coding protein psRNATarget
XM_014766664.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:2023   GUUAUACAGUUGUGGAUUCUG   2043

1.0 PREDICTED: Glycine max uncharacterized LOC102661059 (LOC102661059), mRNA uncharacterized LOC102661059(LOC102661059) coding protein psRNATarget
XM_014770488.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:2008   GUUAUACAGUUGUGGAUUCUG   2028

1.0 PREDICTED: Glycine max uncharacterized LOC106796856 (LOC106796856), mRNA uncharacterized LOC106796856(LOC106796856) coding protein psRNATarget
XM_014779275.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1814   GUUAUACAGUUGUGGAUUCUG   1834

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X7, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
AB934276.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1779   GUUAUACAGUUGUGGAUUCUG   1799

1.0 Glycine max GmTNP3a mRNA for transposase, complete cds, strain: L72-2040 NA coding protein psRNATarget
AB934277.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1776   GUUAUACAGUUGUGGAUUCUG   1796

1.0 Glycine max GmTNP3b mRNA for transposase, complete cds, strain: L72-2040 NA coding protein psRNATarget
XM_014779274.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1814   GUUAUACAGUUGUGGAUUCUG   1834

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X6, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
XM_014779273.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1767   GUUAUACAGUUGUGGAUUCUG   1787

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X5, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
XM_014779270.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1814   GUUAUACAGUUGUGGAUUCUG   1834

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X2, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
XM_014779271.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:1935   GUUAUACAGUUGUGGAUUCUG   1955

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X3, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
XM_014763083.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:3325   GUUAUACAGUUGUGGAUUCUG   3345

1.0 PREDICTED: Glycine max uncharacterized LOC106794966 (LOC106794966), transcript variant X2, mRNA uncharacterized LOC106794966(LOC106794966) coding protein psRNATarget
XM_014779272.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:2957   GUUAUACAGUUGUGGAUUCUG   2977

1.0 PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X4, mRNA uncharacterized LOC100792767(LOC100792767) coding protein psRNATarget
AB934278.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:3768   GUUAUACAGUUGUGGAUUCUG   3788

1.0 Glycine max GmTNP4a mRNA for transposase, complete cds, strain: L72-2040 NA coding protein psRNATarget
AB934279.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||=
targets:3768   GUUAUACAGUUGUGGAUUCUG   3788

1.0 Glycine max GmTNP4b mRNA for transposase, complete cds, strain: L72-2040 NA coding protein psRNATarget
XM_014761576.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:275   GUUAUACAGUUGUGGAUUCUC   295

1.0 PREDICTED: Glycine max uncharacterized LOC106794332 (LOC106794332), mRNA uncharacterized LOC106794332(LOC106794332) coding protein psRNATarget
XM_014770450.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:505   GUUAUACAGUUGUGGAUUCUC   525

1.0 PREDICTED: Glycine max uncharacterized LOC106796841 (LOC106796841), mRNA uncharacterized LOC106796841(LOC106796841) coding protein psRNATarget
XM_014767501.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:835   GUUAUACAGUUGUGGAUUCUC   855

1.0 PREDICTED: Glycine max uncharacterized LOC106796055 (LOC106796055), partial mRNA uncharacterized LOC106796055(LOC106796055) coding protein psRNATarget
XM_014773484.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:2254   GUUAUACAGUUGUGGAUUCUC   2274

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X2, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773485.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:2343   GUUAUACAGUUGUGGAUUCUC   2363

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X3, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773483.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||||||||||||||*
targets:2750   GUUAUACAGUUGUGGAUUCUC   2770

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X1, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014766878.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:2062   GUUAUACAAUUGUGGAUUCUG   2082

2.5 PREDICTED: Glycine max uncharacterized LOC102667238 (LOC102667238), transcript variant X1, mRNA uncharacterized LOC102667238(LOC102667238) coding protein psRNATarget
XM_014770086.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:3210   GUUAUACAAUUGUGGAUUCUG   3230

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X2, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770087.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:3123   GUUAUACAAUUGUGGAUUCUG   3143

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X3, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770089.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:3123   GUUAUACAAUUGUGGAUUCUG   3143

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X5, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770088.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:3130   GUUAUACAAUUGUGGAUUCUG   3150

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X4, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770085.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ||||||||*|||||||||||=
targets:3210   GUUAUACAAUUGUGGAUUCUG   3230

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X1, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014774774.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *||||||||||*||||||||=
targets:490   AUUAUACAGUUAUGGAUUCUG   510

2.5 PREDICTED: Glycine max uncharacterized LOC102666913 (LOC102666913), transcript variant X1, mRNA uncharacterized LOC102666913(LOC102666913) coding protein psRNATarget
XM_006599662.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:275   CUGAUGAAGUUGUGGAUUCUA   295

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100780889), transcript variant X4, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100780889) coding protein psRNATarget
XM_006583041.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:684   CUGAUGAAGUUGUGGAUUCUA   704

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X6, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_006583040.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:738   CUGAUGAAGUUGUGGAUUCUA   758

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X5, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_006599661.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:276   CUGAUGAAGUUGUGGAUUCUA   296

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100780889), transcript variant X3, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100780889) coding protein psRNATarget
XM_006583042.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1520   CUGAUGAAGUUGUGGAUUCUA   1540

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X10, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_003529732.3
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1520   CUGAUGAAGUUGUGGAUUCUA   1540

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X9, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_003548267.3
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:250   CUGAUGAAGUUGUGGAUUCUA   270

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100780889), transcript variant X2, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100780889) coding protein psRNATarget
XM_006599660.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:276   CUGAUGAAGUUGUGGAUUCUA   296

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100780889), transcript variant X1, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100780889) coding protein psRNATarget
XM_014776952.1
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  ***|||=*|||||||||||||
targets:296   AGGAUAUUGUUGUGGAUUCUA   316

3.0 PREDICTED: Glycine max glucosamine 6-phosphate N-acetyltransferase-like (LOC106799008), mRNA glucosamine 6-phosphate N-acetyltransferase-like(LOC106799008) coding protein psRNATarget
XM_006583039.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1471   CUGAUGAAGUUGUGGAUUCUA   1491

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X4, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_006583037.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1498   CUGAUGAAGUUGUGGAUUCUA   1518

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X3, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_006583034.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1523   CUGAUGAAGUUGUGGAUUCUA   1543

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X1, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_006583035.2
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:1529   CUGAUGAAGUUGUGGAUUCUA   1549

3.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100816338), transcript variant X2, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100816338) coding protein psRNATarget
XM_003534063.3
ncRNA:21   CAAUAUGUCAACACCUAAGAU   1
  *|*||=*||||||||||||||
targets:405   CUGAUGAAGUUGUGGAUUCUA   425

3.0 PREDICTED: Glycine max uncharacterized LOC100794895 (LOC100794895), mRNA uncharacterized LOC100794895(LOC100794895) coding protein psRNATarget
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