Search result

BaseInfo

ncRNA ID novel_gma_miR7177
Species Glycine max
Class miRNA
Genome position Chr18:17854920-17854997 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 24
Mature sequence(if miRNA) 1 - AGAAGAGGAUCAUUGUAGCAUUGA - 24
Stem-loop(if miRNA) --AG       U   U   G    GAUGAA   GG UG U
    AAGAGGA CAU GUA CAUU      GAA  U  A G
    ||||||| ||| ||| ||||      |||  |  |
    UUCUUUU GUG UAU GUAA      CUU  A  U A
GUUG       -   -   G    AAGGGA   GA GU A
Stem-loop sequence AGAAGAGGAUCAUUGUAGCAUUGAUGAAGAAGGUUGAUGAAUUGAAGUUCAGGGAAAAUGGUAUGUGUUUUCUUGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771498.1
ncRNA:24   AGUUACG-AUGUUACUAGGAGAAGA   1
  *===|||-||||||||||||||||*
targets:126   CUGGUGCCUACAAUGAUCCUCUUCC   150

3.0 PREDICTED: Glycine max probable aldo-keto reductase 1 (LOC100801325), mRNA probable aldo-keto reductase 1(LOC100801325) coding protein psRNATarget