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BaseInfo

ncRNA ID	novel_gma_miR7175
Species	Glycine max
Class	miRNA
Genome position	Chr18:47215817-47215948 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451607;SRR1451609;SRR1451611
Length	22
Mature sequence(if miRNA)	111 - UUUUUGUUGCAAAUGUUUUGUG - 132
Stem-loop(if miRNA)	---U        CAA      --       A  AAUG    A  UA          AUUU     AAA   U     UUUUGUUG   AUGUUU  UGUGCUU AU    GUAA GA  AUCUAGGAAA    GAUGC   AUC G     ||||||||   ||||||  ||||||| ||    |||| ||  ||||||||||    |||||   |||     AAAACAAU   UAUAAG  AUACGAA UG    CGUU CU  UAGGUUCUUU    CUACG   UAG A CAAU        --A      AU       A  -AAA    A  UA          ----     --G   U
Stem-loop sequence	UUUUUGUUGCAAAUGUUUUGUGCUUAAUAAUGGUAAAGAUAAUCUAGGAAAAUUUGAUGCAAAAUCUGAUGAUGGCAUCUUUCUUGGAUAUUCAUUGCAAAGUAAAGCAUAUAGAAUAUAUAACAAAAUAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556757.3	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   =**|||||||*||||||||||| targets:1185   UUAAAAACAUAUGCAACAAAAA   1206 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100805252 (LOC100805252), mRNA	uncharacterized LOC100805252(LOC100805252)	coding protein	psRNATarget
XM_006580980.2	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   **==|||*|||||||||||||| targets:3033   GUUGAAAAAUUUGCAACAAAAA   3054 Target Full Sequence	2.0	PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X3, mRNA	symplekin-like(LOC100810420)	coding protein	psRNATarget
XM_014776177.1	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   **==|||*|||||||||||||| targets:3032   GUUGAAAAAUUUGCAACAAAAA   3053 Target Full Sequence	2.0	PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X2, mRNA	symplekin-like(LOC100810420)	coding protein	psRNATarget
XM_014776178.1	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   **==|||*|||||||||||||| targets:2919   GUUGAAAAAUUUGCAACAAAAA   2940 Target Full Sequence	2.0	PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X4, mRNA	symplekin-like(LOC100810420)	coding protein	psRNATarget
XM_014776176.1	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   **==|||*|||||||||||||| targets:3032   GUUGAAAAAUUUGCAACAAAAA   3053 Target Full Sequence	2.0	PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X1, mRNA	symplekin-like(LOC100810420)	coding protein	psRNATarget
XM_014779399.1	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   ||-=|||||||||||||||=|| targets:3118   CA-GAAACAUUUGCAACAAGAA   3138 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100796806 (LOC100796806), transcript variant X2, mRNA	uncharacterized LOC100796806(LOC100796806)	coding protein	psRNATarget
XM_006586019.2	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   ||-=|||||||||||||||=|| targets:4333   CA-GAAACAUUUGCAACAAGAA   4353 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100796806 (LOC100796806), transcript variant X1, mRNA	uncharacterized LOC100796806(LOC100796806)	coding protein	psRNATarget
NM_001251390.1	ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1   *=||||||=|||||||*||||| targets:765   GGCAAAACGUUUGCAAAAAAAA   786 Target Full Sequence	2.5	Glycine max uncharacterized LOC100500196 (LOC100500196), mRNA	uncharacterized LOC100500196(LOC100500196)	coding protein	psRNATarget