ncRNA ID | novel_gma_miR7173 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:48417606-48417715 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451607 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCAUGAUUCUGCUGUACUAGAG - 24 |
Stem-loop(if miRNA) |
--          CU C        --A      C      UGUUU      A    U   AAUCAUGAUU  G UGUACUAG   GGGGUG GAAAAA     UACAAU GAAU A   ||||||||||  | ||||||||   |||||| ||||||     |||||| ||||   UUAGUGCUAA  U ACGUGAUC   CCCCAC CUUUUU     AUGUUA CUUG U CU          AG A        ACC      A      --UUU      C    G |
Stem-loop sequence | AAUCAUGAUUCUGCUGUACUAGAGGGGUGCGAAAAAUGUUUUACAAUAGAAUUAUGGUUCCAUUGUAUUUUUUUUCACACCCCCCACUAGUGCAAUGAAAUCGUGAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772630.1 |
|
3.0 | PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 10 (LOC100791642), transcript variant X1, mRNA | cysteine-rich receptor-like protein kinase 10(LOC100791642) | coding protein | psRNATarget | |||||||||
XM_014772631.1 |
|
3.0 | PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 10 (LOC100791642), transcript variant X2, mRNA | cysteine-rich receptor-like protein kinase 10(LOC100791642) | coding protein | psRNATarget |