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BaseInfo

ncRNA ID novel_gma_miR7169
Species Glycine max
Class miRNA
Genome position Chr17:33804401-33804563 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 24
Mature sequence(if miRNA) 140 - AUUAUACAAUAACUCGACUAGUGU - 163
Stem-loop(if miRNA) --           A   --    AGUGUUU  -    AGAA      -UUGU     AGG     A   GAA  UG --A       AA
  AUUAUACAAUA CUC  GACU       AC CUUG    AAAUGC     ACGCA   UGUUA UAA   AG  U   GGGUUUC  G
  ||||||||||| |||  ||||       || ||||    ||||||     |||||   ||||| |||   ||  |   |||||||
  UAAUAUGUUAU GGG  CUGG       UG GAAC    UUUGUG     UGUGU   ACAAU GUU   UU  G   CCCAAGG  U
CU           -   UA    -----AU  U    AAAG      CAAAU     --A     -   AAA  GU GAG       AU
Stem-loop sequence AUUAUACAAUAACUCGACUAGUGUUUACCUUGAGAAAAAUGCUUGUACGCAAGGUGUUAAUAAGAAAGUGUAGGGUUUCAAGUUAGGAACCCGAGGUGUUAAAUUGUAACAAUGUGUUAAACGUGUUUGAAACAAGUGUUAGGUCAUGGGUAUUGUAUAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577887.2
ncRNA:24   UGUGAUCAGCUCAAUAACAUAUUA   1
  *||=*||*=|||||||||||||||
targets:791   CCAUCAGAUGAGUUAUUGUAUAAU   814

2.0 PREDICTED: Glycine max uncharacterized LOC100812901 (LOC100812901), mRNA uncharacterized LOC100812901(LOC100812901) coding protein psRNATarget