ncRNA ID | novel_gma_miR7169 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:33804401-33804563 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451607 |
Length | 24 |
Mature sequence(if miRNA) | 140 - AUUAUACAAUAACUCGACUAGUGU - 163 |
Stem-loop(if miRNA) |
--           A   --    AGUGUUU  -    AGAA      -UUGU     AGG     A   GAA  UG --A       AA   AUUAUACAAUA CUC  GACU       AC CUUG    AAAUGC     ACGCA   UGUUA UAA   AG  U   GGGUUUC  G   ||||||||||| |||  ||||       || ||||    ||||||     |||||   ||||| |||   ||  |   |||||||   UAAUAUGUUAU GGG  CUGG       UG GAAC    UUUGUG     UGUGU   ACAAU GUU   UU  G   CCCAAGG  U CU           -   UA    -----AU  U    AAAG      CAAAU     --A     -   AAA  GU GAG       AU |
Stem-loop sequence | AUUAUACAAUAACUCGACUAGUGUUUACCUUGAGAAAAAUGCUUGUACGCAAGGUGUUAAUAAGAAAGUGUAGGGUUUCAAGUUAGGAACCCGAGGUGUUAAAUUGUAACAAUGUGUUAAACGUGUUUGAAACAAGUGUUAGGUCAUGGGUAUUGUAUAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577887.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100812901 (LOC100812901), mRNA | uncharacterized LOC100812901(LOC100812901) | coding protein | psRNATarget |